2010-01-15

Bioinfo

• [陽明] 跑了 8141 小時都還不結束的 test pattern

  19098 ?        SN     0:00 /bin/bash /home/jazz/f-motif/motif.sh 100110022113 ELM_1208_Homo-sapiens_backgroundset_S_13.txt PCM 50 20 10 1 10
  19099 ?        SNl  8141:10 java -cp . fmotif.MotifFinderV6_5 100110022113.txt ELM_1208_Homo-sapiens_backgroundset_S_13.txt PCM 50 20 10 1 10
  

• 在觀察時想到一個問題： java 支援多核心嘛????

  top - 19:12:42 up 46 days, 56 min,  1 user,  load average: 1.00, 0.99, 0.91
  Tasks:   1 total,   0 running,   1 sleeping,   0 stopped,   0 zombie
  Cpu0  :  0.0%us,  0.0%sy,  0.0%ni,100.0%id,  0.0%wa,  0.0%hi,  0.0%si,  0.0%st
  Cpu1  :  0.0%us,  0.3%sy, 27.2%ni, 72.4%id,  0.0%wa,  0.0%hi,  0.0%si,  0.0%st
  Cpu2  :  0.0%us,  0.3%sy, 72.3%ni, 27.3%id,  0.0%wa,  0.0%hi,  0.0%si,  0.0%st
  Cpu3  :  0.0%us,  0.0%sy,  0.0%ni,100.0%id,  0.0%wa,  0.0%hi,  0.0%si,  0.0%st
  Mem:   1018984k total,   591148k used,   427836k free,    42644k buffers
  Swap:  2980016k total,      796k used,  2979220k free,   242536k cached
  
    PID USER      PR  NI  VIRT  RES  SHR S %CPU %MEM    TIME+  COMMAND            
  32245 www-data  30  10  380m 191m 7824 S  110 19.3  38:50.30 java               
  

• ​Multicore processing for client-side Java applications

Javascript

• ​Javascript 飛向雲端 @ COSCUP 2009

HPC

• ​SUN 免費電子書 - High Performance Computing (高效能運算)

生活

• ​中藥果菜汁止咳寧嗽