​http://evolution.gs.washington.edu/phylip/getme.html

【說明】

【安裝】

預先安裝套件：

• libx11-dev、libxaw

    wget http://evolution.gs.washington.edu/phylip/download/phylip-3.69.tar.gz
    tar zxvf phylip-3.69.tar.gz
    cd src
    make install

【測試】

1. 複製 HCV.phy 並將其重新命名為 infile。

   cp HCV.phy infile
   

2. 畫面：

   Bootstrapping algorithm, version 3.69
   
   Settings for this run:
     D      Sequence, Morph, Rest., Gene Freqs?  Molecular sequences
     J  Bootstrap, Jackknife, Permute, Rewrite?  Bootstrap
     %    Regular or altered sampling fraction?  regular
     B      Block size for block-bootstrapping?  1 (regular bootstrap)
     R                     How many replicates?  100
     W              Read weights of characters?  No
     C                Read categories of sites?  No
     S     Write out data sets or just weights?  Data sets
     I             Input sequences interleaved?  Yes
     0      Terminal type (IBM PC, ANSI, none)?  ANSI
     1       Print out the data at start of run  No
     2     Print indications of progress of run  Yes
   
     Y to accept these or type the letter for one to change
   

   輸入

   y 
   

3. 畫面：

   Random number seed (must be odd)?   
   

   輸入

   5
   

4. 畫面：

   completed replicate number   10
   completed replicate number   20
   completed replicate number   30
   completed replicate number   40
   completed replicate number   50
   completed replicate number   60
   completed replicate number   70
   completed replicate number   80
   completed replicate number   90
   completed replicate number  100
   
   Output written to file "outfile"
   
   Done.
   

   輸出：outfile