close Warning: Can't synchronize with repository "(default)" (Unsupported version control system "svn": libsvn_diff-1.so.1: failed to map segment from shared object: Cannot allocate memory). Look in the Trac log for more information.

Changes between Version 3 and Version 4 of jazz/11-05-04


Ignore:
Timestamp:
May 4, 2011, 1:56:18 AM (15 years ago)
Author:
jazz
Comment:

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Legend:

Unmodified
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  • jazz/11-05-04

    v3 v4  
    1515~/velvet_1.1.03$ ./velveth output 17 -fasta -short data/test_long.fa
    1616~/velvet_1.1.03$ ./velvetg output/ -exp_cov 3 -min_contig_lgth 100
     17}}}
     18 * 使用 [http://packages.debian.org/valgrind valgrind] 來進行記憶體分析
     19{{{
     20~/velvet_1.1.03$ sudo apt-get install valgrind
     21~/velvet_1.1.03$ valgrind -v --leak-check=full --show-reachable=yes ./velveth output 17 -fasta -short data/test_long.fa 2> velveth.log
     22~/velvet_1.1.03$ valgrind -v --leak-check=full --show-reachable=yes ./velvetg output/ -exp_cov 3 -min_contig_lgth 100 2> velvetg.log
    1723}}}
    1824 * 使用 gprof 進行 profile 分析