* Install R/BioConductor :
{{{
root@client-01:~# apt-get install build-essential g77
root@client-01:~# apt-get install refblas3 refblas3-dev
root@client-01:~# apt-get install r-base-core r-base-dev r-bioc-repostools r-recommended
}}}

 * Then switch into R command line mode after you finish the installation of R above
{{{
> source("http://www.bioconductor.org/biocLite.R")
> biocLite()
}}}

 * affy affydata affyPLM annaffy annotate Biobase Biostrings Dyndoc gcrma [[BR]]
   genefilter geneplotter hgu95av2 limma marray matchprobes multtest ROC vsn xtable affyQCReport[[BR]]
   will be installed by default.

 * If you just need to install some specified packages, you could issue the commands in R command line like this:
{{{
> biocLite(c("pkg1", "pkg2"))
}}}