Last change
on this file since 221 was
23,
checked in by jazz, 17 years ago
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Sample R Code from YM. Prof. Chung
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File size:
485 bytes
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1 | ######### MAS5 ################### |
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2 | |
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3 | |
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4 | setwd("D:\\Women cancer\\ovary") |
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5 | |
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6 | rm(list=ls()) |
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7 | |
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8 | memory.limit(size=2000) |
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9 | |
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10 | memory.size() |
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11 | |
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12 | library(affy) |
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13 | |
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14 | fileNames<-dir(".", "[.]CEL")[1:10] |
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15 | |
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16 | LatinData<-ReadAffy(filenames=fileNames) ### Read CEL files |
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17 | |
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18 | str(LatinData) |
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19 | |
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20 | k<-LatinData@exprs |
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21 | |
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22 | LatinData.mas5<-expresso(LatinData, pmcorrect.method="mas", bgcorrect.method="mas", summary.method="mas") |
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23 | |
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24 | LatinData.mas5.norm<-affy.scalevalue.exprSet(LatinData.mas5, sc=500) |
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25 | ## 完成到此即成功 ## |
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26 | |
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