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jazz/11-05-04: velvetg_massif.log

File velvetg_massif.log, 36.8 KB (added by jazz, 13 years ago)

Line
1	--------------------------------------------------------------------------------
2	Command: ./velvetg output/ -exp_cov 3 -min_contig_lgth 100
3	Massif arguments: (none)
4	ms_print arguments: massif.out.10561
5	--------------------------------------------------------------------------------
6
7
8	MB
9	2.277^ #
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27	\| ::@ ::: #
28	\| :::@ :::::#:::::::@:::::::::@:::@::::::::::::::::::::::::::
29	0 +----------------------------------------------------------------------->Mi
30	0 125.5
31
32	Number of snapshots: 73
33	Detailed snapshots: [2, 5, 6, 14, 16, 22, 30 (peak), 42, 58, 68]
34
35	--------------------------------------------------------------------------------
36	n time(i) total(B) useful-heap(B) extra-heap(B) stacks(B)
37	--------------------------------------------------------------------------------
38	0 0 0 0 0 0
39	1 896,153 8,888 8,478 410 0
40	2 1,973,156 11,872 11,099 773 0
41	93.49% (11,099B) (heap allocation functions) malloc/new/new[], --alloc-fns, etc.
42	->47.78% (5,672B) 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
43	\| ->19.53% (2,319B) 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
44	\| \| ->19.53% (2,319B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
45	\| \|
46	\| ->18.20% (2,161B) 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
47	\| \| ->18.20% (2,161B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
48	\| \|
49	\| ->10.04% (1,192B) 0x8050AEB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
50	\| ->10.04% (1,192B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
51	\|
52	->34.13% (4,052B) 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
53	\| ->34.13% (4,052B) 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
54	\| ->34.13% (4,052B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
55	\|
56	->06.28% (746B) 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
57	\| ->06.28% (746B) in 9 places, all below massif's threshold (01.00%)
58	\|
59	->02.96% (352B) 0x40AC00D: __fopen_internal (iofopen.c:76)
60	\| ->02.96% (352B) 0x40AC0DA: fopen@@GLIBC_2.1 (iofopen.c:107)
61	\| ->02.96% (352B) 0x80509ED: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
62	\| \| ->02.96% (352B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
63	\| \|
64	\| ->00.00% (0B) in 1+ places, all below ms_print's threshold (01.00%)
65	\|
66	->01.89% (224B) 0x40DACC5: __tzfile_read (tzfile.c:257)
67	\| ->01.89% (224B) 0x40DA026: tzset_internal (tzset.c:439)
68	\| ->01.89% (224B) 0x40DA12F: __tz_convert (tzset.c:624)
69	\| ->01.89% (224B) 0x40D882D: localtime (localtime.c:43)
70	\| ->01.89% (224B) 0x40D871F: ctime (ctime.c:32)
71	\| ->01.89% (224B) 0x8065FC1: logInstructions (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
72	\| ->01.89% (224B) 0x8053EF3: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
73	\|
74	->00.45% (53B) in 1+ places, all below ms_print's threshold (01.00%)
75
76	--------------------------------------------------------------------------------
77	n time(i) total(B) useful-heap(B) extra-heap(B) stacks(B)
78	--------------------------------------------------------------------------------
79	3 2,817,140 14,096 13,115 981 0
80	4 4,403,733 22,696 21,037 1,659 0
81	5 5,504,103 25,680 23,661 2,019 0
82	92.14% (23,661B) (heap allocation functions) malloc/new/new[], --alloc-fns, etc.
83	->55.23% (14,182B) 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
84	\| ->25.38% (6,517B) 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
85	\| \| ->25.38% (6,517B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
86	\| \|
87	\| ->25.21% (6,473B) 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
88	\| \| ->25.21% (6,473B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
89	\| \|
90	\| ->04.64% (1,192B) 0x8050AEB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
91	\| ->04.64% (1,192B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
92	\|
93	->31.56% (8,104B) 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
94	\| ->31.56% (8,104B) 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
95	\| ->31.56% (8,104B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
96	\|
97	->02.90% (746B) 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
98	\| ->02.90% (746B) in 9 places, all below massif's threshold (01.00%)
99	\|
100	->01.37% (352B) 0x40AC00D: __fopen_internal (iofopen.c:76)
101	\| ->01.37% (352B) 0x40AC0DA: fopen@@GLIBC_2.1 (iofopen.c:107)
102	\| ->01.37% (352B) 0x80509ED: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
103	\| \| ->01.37% (352B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
104	\| \|
105	\| ->00.00% (0B) in 1+ places, all below ms_print's threshold (01.00%)
106	\|
107	->01.08% (277B) in 3 places, all below massif's threshold (01.00%)
108
109	--------------------------------------------------------------------------------
110	n time(i) total(B) useful-heap(B) extra-heap(B) stacks(B)
111	--------------------------------------------------------------------------------
112	6 7,120,717 34,304 31,613 2,691 0
113	92.16% (31,613B) (heap allocation functions) malloc/new/new[], --alloc-fns, etc.
114	->52.71% (18,082B) 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
115	\| ->24.71% (8,476B) 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
116	\| \| ->24.71% (8,476B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
117	\| \|
118	\| ->24.53% (8,414B) 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
119	\| \| ->24.53% (8,414B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
120	\| \|
121	\| ->03.47% (1,192B) 0x8050AEB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
122	\| ->03.47% (1,192B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
123	\|
124	->35.44% (12,156B) 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
125	\| ->35.44% (12,156B) 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
126	\| ->35.44% (12,156B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
127	\|
128	->02.17% (746B) 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
129	\| ->02.17% (746B) in 9 places, all below massif's threshold (01.00%)
130	\|
131	->01.03% (352B) 0x40AC00D: __fopen_internal (iofopen.c:76)
132	\| ->01.03% (352B) 0x40AC0DA: fopen@@GLIBC_2.1 (iofopen.c:107)
133	\| ->01.03% (352B) 0x80509ED: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
134	\| \| ->01.03% (352B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
135	\| \|
136	\| ->00.00% (0B) in 1+ places, all below ms_print's threshold (01.00%)
137	\|
138	->00.81% (277B) in 1+ places, all below ms_print's threshold (01.00%)
139
140	--------------------------------------------------------------------------------
141	n time(i) total(B) useful-heap(B) extra-heap(B) stacks(B)
142	--------------------------------------------------------------------------------
143	7 8,839,291 43,192 39,657 3,535 0
144	8 10,439,593 51,800 47,375 4,425 0
145	9 11,568,907 55,000 49,873 5,127 0
146	10 12,346,601 61,296 55,651 5,645 0
147	11 13,737,728 69,272 62,752 6,520 0
148	12 14,918,262 80,264 72,381 7,883 0
149	13 16,778,194 88,592 78,701 9,891 0
150	14 18,107,144 94,336 83,491 10,845 0
151	88.50% (83,491B) (heap allocation functions) malloc/new/new[], --alloc-fns, etc.
152	->41.75% (39,388B) 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
153	\| ->17.72% (16,718B) 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
154	\| \| ->17.72% (16,718B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
155	\| \|
156	\| ->17.72% (16,718B) 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
157	\| \| ->17.72% (16,718B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
158	\| \|
159	\| ->02.52% (2,380B) 0x8051997: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
160	\| \| ->02.52% (2,380B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
161	\| \|
162	\| ->02.52% (2,380B) 0x80519BF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
163	\| \| ->02.52% (2,380B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
164	\| \|
165	\| ->01.26% (1,192B) 0x8050AEB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
166	\| ->01.26% (1,192B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
167	\|
168	->32.23% (30,408B) 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
169	\| ->30.07% (28,364B) 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
170	\| \| ->30.07% (28,364B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
171	\| \|
172	\| ->02.17% (2,044B) 0x804AC5F: allocateArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
173	\| ->02.17% (2,044B) 0x804D3B3: createArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
174	\| ->02.17% (2,044B) 0x80515AD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
175	\| ->02.17% (2,044B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
176	\|
177	->13.85% (13,066B) 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
178	\| ->13.04% (12,300B) 0x80518BD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
179	\| \| ->13.04% (12,300B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
180	\| \|
181	\| ->00.81% (766B) in 1+ places, all below ms_print's threshold (01.00%)
182	\|
183	->00.67% (629B) in 1+ places, all below ms_print's threshold (01.00%)
184
185	--------------------------------------------------------------------------------
186	n time(i) total(B) useful-heap(B) extra-heap(B) stacks(B)
187	--------------------------------------------------------------------------------
188	15 18,941,183 98,040 86,361 11,679 0
189	16 20,229,339 103,904 90,501 13,403 0
190	87.10% (90,501B) (heap allocation functions) malloc/new/new[], --alloc-fns, etc.
191	->37.91% (39,388B) 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
192	\| ->16.09% (16,718B) 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
193	\| \| ->16.09% (16,718B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
194	\| \|
195	\| ->16.09% (16,718B) 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
196	\| \| ->16.09% (16,718B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
197	\| \|
198	\| ->02.29% (2,380B) 0x8051997: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
199	\| \| ->02.29% (2,380B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
200	\| \|
201	\| ->02.29% (2,380B) 0x80519BF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
202	\| \| ->02.29% (2,380B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
203	\| \|
204	\| ->01.15% (1,192B) 0x8050AEB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
205	\| ->01.15% (1,192B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
206	\|
207	->29.27% (30,408B) 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
208	\| ->27.30% (28,364B) 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
209	\| \| ->27.30% (28,364B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
210	\| \|
211	\| ->01.97% (2,044B) 0x804AC5F: allocateArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
212	\| ->01.97% (2,044B) 0x804D3B3: createArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
213	\| ->01.97% (2,044B) 0x80515AD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
214	\| ->01.97% (2,044B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
215	\|
216	->19.32% (20,076B) 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
217	\| ->18.58% (19,310B) 0x80518BD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
218	\| \| ->18.58% (19,310B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
219	\| \|
220	\| ->00.74% (766B) in 1+ places, all below ms_print's threshold (01.00%)
221	\|
222	->00.61% (629B) in 1+ places, all below ms_print's threshold (01.00%)
223
224	--------------------------------------------------------------------------------
225	n time(i) total(B) useful-heap(B) extra-heap(B) stacks(B)
226	--------------------------------------------------------------------------------
227	17 22,425,236 103,592 90,189 13,403 0
228	18 23,728,723 170,192 151,544 18,648 0
229	19 25,512,801 247,232 221,629 25,603 0
230	20 26,701,745 298,064 268,431 29,633 0
231	21 27,890,905 348,752 315,247 33,505 0
232	22 29,135,696 401,888 364,324 37,564 0
233	90.65% (364,324B) (heap allocation functions) malloc/new/new[], --alloc-fns, etc.
234	->70.63% (283,859B) 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
235	\| ->65.60% (263,650B) 0x8066429: importReadSet (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
236	\| \| ->65.60% (263,650B) 0x80553C1: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
237	\| \|
238	\| ->04.80% (19,310B) 0x80518BD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
239	\| \| ->04.80% (19,310B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
240	\| \|
241	\| ->00.22% (899B) in 1+ places, all below ms_print's threshold (01.00%)
242	\|
243	->12.30% (49,428B) 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
244	\| ->04.16% (16,718B) 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
245	\| \| ->04.16% (16,718B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
246	\| \|
247	\| ->04.16% (16,718B) 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
248	\| \| ->04.16% (16,718B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
249	\| \|
250	\| ->01.99% (8,000B) 0x80662CE: importReadSet (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
251	\| \| ->01.99% (8,000B) 0x80553C1: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
252	\| \|
253	\| ->01.99% (7,992B) in 5 places, all below massif's threshold (01.00%)
254	\|
255	->07.57% (30,408B) 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
256	\| ->07.06% (28,364B) 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
257	\| \| ->07.06% (28,364B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
258	\| \|
259	\| ->00.51% (2,044B) in 1+ places, all below ms_print's threshold (01.00%)
260	\|
261	->00.16% (629B) in 1+ places, all below ms_print's threshold (01.00%)
262
263	--------------------------------------------------------------------------------
264	n time(i) total(B) useful-heap(B) extra-heap(B) stacks(B)
265	--------------------------------------------------------------------------------
266	23 33,307,931 401,528 363,972 37,556 0
267	24 34,366,455 430,592 396,511 34,081 0
268	25 35,558,415 381,056 351,447 29,609 0
269	26 36,750,375 331,520 306,383 25,137 0
270	27 37,942,335 281,984 260,736 21,248 0
271	28 39,134,295 232,448 214,984 17,464 0
272	29 40,661,243 173,888 160,439 13,449 0
273	30 42,149,046 2,387,184 2,372,741 14,443 0
274	99.39% (2,372,741B) (heap allocation functions) malloc/new/new[], --alloc-fns, etc.
275	->89.12% (2,127,556B) 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
276	\| ->87.85% (2,097,148B) 0x806E23B: expandLongNode (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
277	\| \| ->87.85% (2,097,148B) 0x806E94F: exploitShortReadPairs (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
278	\| \| ->87.85% (2,097,148B) 0x80543B6: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
279	\| \|
280	\| ->01.19% (28,364B) 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
281	\| \| ->01.19% (28,364B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
282	\| \|
283	\| ->00.09% (2,044B) in 1+ places, all below ms_print's threshold (01.00%)
284	\|
285	->07.76% (185,260B) 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
286	\| ->03.42% (81,608B) 0x80733FF: prepareGraphForLocalCorrections (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
287	\| \| ->03.42% (81,608B) 0x806E8C8: exploitShortReadPairs (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
288	\| \| ->03.42% (81,608B) 0x80543B6: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
289	\| \|
290	\| ->02.25% (53,652B) in 26 places, all below massif's threshold (01.00%)
291	\| \|
292	\| ->02.09% (50,000B) 0x8049A05: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
293	\| ->02.09% (50,000B) 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
294	\| ->02.09% (50,000B) 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
295	\|
296	->02.25% (53,672B) 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
297	\| ->02.25% (53,672B) in 18 places, all below massif's threshold (01.00%)
298	\|
299	->00.26% (6,253B) in 1+ places, all below ms_print's threshold (01.00%)
300
301	--------------------------------------------------------------------------------
302	n time(i) total(B) useful-heap(B) extra-heap(B) stacks(B)
303	--------------------------------------------------------------------------------
304	31 43,169,494 181,496 168,011 13,485 0
305	32 44,859,167 181,496 168,011 13,485 0
306	33 45,917,389 181,496 168,011 13,485 0
307	34 46,999,637 181,496 168,011 13,485 0
308	35 48,799,821 181,496 168,011 13,485 0
309	36 50,410,765 181,496 168,011 13,485 0
310	37 51,544,977 181,496 168,011 13,485 0
311	38 52,624,316 181,496 168,011 13,485 0
312	39 53,432,410 181,496 168,011 13,485 0
313	40 54,949,668 181,496 168,011 13,485 0
314	41 56,339,363 181,496 168,011 13,485 0
315	42 57,550,113 181,496 168,011 13,485 0
316	92.57% (168,011B) (heap allocation functions) malloc/new/new[], --alloc-fns, etc.
317	->47.23% (85,726B) 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
318	\| ->27.55% (50,000B) 0x8049A05: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
319	\| \| ->27.55% (50,000B) 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
320	\| \| ->27.55% (50,000B) 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
321	\| \|
322	\| ->09.21% (16,718B) 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
323	\| \| ->09.21% (16,718B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
324	\| \|
325	\| ->09.21% (16,718B) 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
326	\| \| ->09.21% (16,718B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
327	\| \|
328	\| ->01.10% (2,000B) 0x80662E8: importReadSet (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
329	\| \| ->01.10% (2,000B) 0x80553C1: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
330	\| \|
331	\| ->00.16% (290B) in 1+ places, all below ms_print's threshold (01.00%)
332	\|
333	->24.30% (44,104B) 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
334	\| ->10.64% (19,310B) 0x80518BD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
335	\| \| ->10.64% (19,310B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
336	\| \|
337	\| ->08.82% (16,000B) 0x80499A2: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
338	\| \| ->08.82% (16,000B) 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
339	\| \| ->08.82% (16,000B) 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
340	\| \|
341	\| ->04.41% (8,000B) 0x8065E35: createReadPairingArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
342	\| \| ->04.41% (8,000B) 0x8054341: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
343	\| \|
344	\| ->00.44% (794B) in 1+ places, all below ms_print's threshold (01.00%)
345	\|
346	->16.75% (30,408B) 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
347	\| ->15.63% (28,364B) 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
348	\| \| ->15.63% (28,364B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
349	\| \|
350	\| ->01.13% (2,044B) 0x804AC5F: allocateArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
351	\| \| ->01.13% (2,044B) 0x804D3B3: createArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
352	\| \| ->01.13% (2,044B) 0x80515AD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
353	\| \| ->01.13% (2,044B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
354	\| \|
355	\| ->00.00% (0B) in 1+ places, all below ms_print's threshold (01.00%)
356	\|
357	->03.94% (7,144B) 0x807D20A: reallocOrExit4 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
358	\| ->01.31% (2,384B) in 2 places, all below massif's threshold (01.00%)
359	\| \|
360	\| ->01.31% (2,380B) 0x804C7D7: renumberNodes (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
361	\| \| ->01.31% (2,380B) 0x80570DB: concatenateGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
362	\| \| \| ->01.31% (2,380B) 0x80543FE: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
363	\| \| \| \|
364	\| \| \| ->00.00% (0B) in 1+ places, all below ms_print's threshold (01.00%)
365	\| \| \|
366	\| \| ->00.00% (0B) in 1+ places, all below ms_print's threshold (01.00%)
367	\| \|
368	\| ->01.31% (2,380B) 0x804C800: renumberNodes (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
369	\| ->01.31% (2,380B) 0x80570DB: concatenateGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
370	\| \| ->01.31% (2,380B) 0x80543FE: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
371	\| \| \|
372	\| \| ->00.00% (0B) in 1+ places, all below ms_print's threshold (01.00%)
373	\| \|
374	\| ->00.00% (0B) in 1+ places, all below ms_print's threshold (01.00%)
375	\|
376	->00.35% (629B) in 1+ places, all below ms_print's threshold (01.00%)
377
378	--------------------------------------------------------------------------------
379	n time(i) total(B) useful-heap(B) extra-heap(B) stacks(B)
380	--------------------------------------------------------------------------------
381	43 58,521,602 181,496 168,011 13,485 0
382	44 60,387,230 181,496 168,011 13,485 0
383	45 61,774,807 181,496 168,011 13,485 0
384	46 62,663,796 181,496 168,011 13,485 0
385	47 63,734,787 181,496 168,011 13,485 0
386	48 65,581,286 181,496 168,011 13,485 0
387	49 67,173,391 181,496 168,011 13,485 0
388	50 67,996,600 181,496 168,011 13,485 0
389	51 68,861,240 181,496 168,011 13,485 0
390	52 69,870,635 181,496 168,011 13,485 0
391	53 70,745,259 181,496 168,011 13,485 0
392	54 71,733,159 181,496 168,011 13,485 0
393	55 72,563,529 181,496 168,011 13,485 0
394	56 73,462,422 181,496 168,011 13,485 0
395	57 74,361,033 181,496 168,011 13,485 0
396	58 75,174,852 181,496 168,011 13,485 0
397	92.57% (168,011B) (heap allocation functions) malloc/new/new[], --alloc-fns, etc.
398	->47.23% (85,726B) 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
399	\| ->27.55% (50,000B) 0x8049A05: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
400	\| \| ->27.55% (50,000B) 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
401	\| \| ->27.55% (50,000B) 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
402	\| \|
403	\| ->09.21% (16,718B) 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
404	\| \| ->09.21% (16,718B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
405	\| \|
406	\| ->09.21% (16,718B) 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
407	\| \| ->09.21% (16,718B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
408	\| \|
409	\| ->01.10% (2,000B) 0x80662E8: importReadSet (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
410	\| \| ->01.10% (2,000B) 0x80553C1: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
411	\| \|
412	\| ->00.16% (290B) in 1+ places, all below ms_print's threshold (01.00%)
413	\|
414	->24.30% (44,104B) 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
415	\| ->10.64% (19,310B) 0x80518BD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
416	\| \| ->10.64% (19,310B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
417	\| \|
418	\| ->08.82% (16,000B) 0x80499A2: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
419	\| \| ->08.82% (16,000B) 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
420	\| \| ->08.82% (16,000B) 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
421	\| \|
422	\| ->04.41% (8,000B) 0x8065E35: createReadPairingArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
423	\| \| ->04.41% (8,000B) 0x8054341: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
424	\| \|
425	\| ->00.44% (794B) in 1+ places, all below ms_print's threshold (01.00%)
426	\|
427	->16.75% (30,408B) 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
428	\| ->15.63% (28,364B) 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
429	\| \| ->15.63% (28,364B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
430	\| \|
431	\| ->01.13% (2,044B) 0x804AC5F: allocateArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
432	\| \| ->01.13% (2,044B) 0x804D3B3: createArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
433	\| \| ->01.13% (2,044B) 0x80515AD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
434	\| \| ->01.13% (2,044B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
435	\| \|
436	\| ->00.00% (0B) in 1+ places, all below ms_print's threshold (01.00%)
437	\|
438	->03.94% (7,144B) 0x807D20A: reallocOrExit4 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
439	\| ->01.31% (2,384B) in 2 places, all below massif's threshold (01.00%)
440	\| \|
441	\| ->01.31% (2,380B) 0x804C7D7: renumberNodes (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
442	\| \| ->01.31% (2,380B) 0x80570DB: concatenateGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
443	\| \| \| ->01.31% (2,380B) 0x80543FE: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
444	\| \| \| \|
445	\| \| \| ->00.00% (0B) in 1+ places, all below ms_print's threshold (01.00%)
446	\| \| \|
447	\| \| ->00.00% (0B) in 1+ places, all below ms_print's threshold (01.00%)
448	\| \|
449	\| ->01.31% (2,380B) 0x804C800: renumberNodes (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
450	\| ->01.31% (2,380B) 0x80570DB: concatenateGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
451	\| \| ->01.31% (2,380B) 0x80543FE: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
452	\| \| \|
453	\| \| ->00.00% (0B) in 1+ places, all below ms_print's threshold (01.00%)
454	\| \|
455	\| ->00.00% (0B) in 1+ places, all below ms_print's threshold (01.00%)
456	\|
457	->00.35% (629B) in 1+ places, all below ms_print's threshold (01.00%)
458
459	--------------------------------------------------------------------------------
460	n time(i) total(B) useful-heap(B) extra-heap(B) stacks(B)
461	--------------------------------------------------------------------------------
462	59 75,990,778 181,496 168,011 13,485 0
463	60 76,839,553 181,496 168,011 13,485 0
464	61 77,732,760 181,496 168,011 13,485 0
465	62 78,569,147 181,496 168,011 13,485 0
466	63 79,491,072 181,496 168,011 13,485 0
467	64 80,275,205 181,496 168,011 13,485 0
468	65 81,085,261 181,496 168,011 13,485 0
469	66 81,905,767 181,496 168,011 13,485 0
470	67 82,701,841 181,496 168,011 13,485 0
471	68 83,704,805 181,496 168,011 13,485 0
472	92.57% (168,011B) (heap allocation functions) malloc/new/new[], --alloc-fns, etc.
473	->47.23% (85,726B) 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
474	\| ->27.55% (50,000B) 0x8049A05: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
475	\| \| ->27.55% (50,000B) 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
476	\| \| ->27.55% (50,000B) 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
477	\| \|
478	\| ->09.21% (16,718B) 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
479	\| \| ->09.21% (16,718B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
480	\| \|
481	\| ->09.21% (16,718B) 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
482	\| \| ->09.21% (16,718B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
483	\| \|
484	\| ->01.10% (2,000B) 0x80662E8: importReadSet (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
485	\| \| ->01.10% (2,000B) 0x80553C1: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
486	\| \|
487	\| ->00.16% (290B) in 1+ places, all below ms_print's threshold (01.00%)
488	\|
489	->24.30% (44,104B) 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
490	\| ->10.64% (19,310B) 0x80518BD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
491	\| \| ->10.64% (19,310B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
492	\| \|
493	\| ->08.82% (16,000B) 0x80499A2: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
494	\| \| ->08.82% (16,000B) 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
495	\| \| ->08.82% (16,000B) 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
496	\| \|
497	\| ->04.41% (8,000B) 0x8065E35: createReadPairingArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
498	\| \| ->04.41% (8,000B) 0x8054341: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
499	\| \|
500	\| ->00.44% (794B) in 1+ places, all below ms_print's threshold (01.00%)
501	\|
502	->16.75% (30,408B) 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
503	\| ->15.63% (28,364B) 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
504	\| \| ->15.63% (28,364B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
505	\| \|
506	\| ->01.13% (2,044B) 0x804AC5F: allocateArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
507	\| \| ->01.13% (2,044B) 0x804D3B3: createArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
508	\| \| ->01.13% (2,044B) 0x80515AD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
509	\| \| ->01.13% (2,044B) 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
510	\| \|
511	\| ->00.00% (0B) in 1+ places, all below ms_print's threshold (01.00%)
512	\|
513	->03.94% (7,144B) 0x807D20A: reallocOrExit4 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
514	\| ->01.31% (2,384B) in 2 places, all below massif's threshold (01.00%)
515	\| \|
516	\| ->01.31% (2,380B) 0x804C7D7: renumberNodes (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
517	\| \| ->01.31% (2,380B) 0x80570DB: concatenateGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
518	\| \| \| ->01.31% (2,380B) 0x80543FE: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
519	\| \| \| \|
520	\| \| \| ->00.00% (0B) in 1+ places, all below ms_print's threshold (01.00%)
521	\| \| \|
522	\| \| ->00.00% (0B) in 1+ places, all below ms_print's threshold (01.00%)
523	\| \|
524	\| ->01.31% (2,380B) 0x804C800: renumberNodes (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
525	\| ->01.31% (2,380B) 0x80570DB: concatenateGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
526	\| \| ->01.31% (2,380B) 0x80543FE: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg)
527	\| \| \|
528	\| \| ->00.00% (0B) in 1+ places, all below ms_print's threshold (01.00%)
529	\| \|
530	\| ->00.00% (0B) in 1+ places, all below ms_print's threshold (01.00%)
531	\|
532	->00.35% (629B) in 1+ places, all below ms_print's threshold (01.00%)
533
534	--------------------------------------------------------------------------------
535	n time(i) total(B) useful-heap(B) extra-heap(B) stacks(B)
536	--------------------------------------------------------------------------------
537	69 84,516,428 181,496 168,011 13,485 0
538	70 85,307,941 181,496 168,011 13,485 0
539	71 89,232,699 181,120 167,651 13,469 0
540	72 131,622,888 181,120 167,651 13,469 0

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