1 | desc: (none) |
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2 | cmd: ./velvetg output/ -exp_cov 3 -min_contig_lgth 100 |
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3 | time_unit: i |
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4 | #----------- |
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5 | snapshot=0 |
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6 | #----------- |
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7 | time=0 |
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8 | mem_heap_B=0 |
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9 | mem_heap_extra_B=0 |
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10 | mem_stacks_B=0 |
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11 | heap_tree=empty |
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12 | #----------- |
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13 | snapshot=1 |
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14 | #----------- |
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15 | time=896153 |
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16 | mem_heap_B=8478 |
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17 | mem_heap_extra_B=410 |
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18 | mem_stacks_B=0 |
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19 | heap_tree=empty |
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20 | #----------- |
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21 | snapshot=2 |
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22 | #----------- |
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23 | time=1973156 |
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24 | mem_heap_B=11099 |
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25 | mem_heap_extra_B=773 |
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26 | mem_stacks_B=0 |
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27 | heap_tree=detailed |
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28 | n6: 11099 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. |
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29 | n3: 5672 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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30 | n1: 2319 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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31 | n0: 2319 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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32 | n1: 2161 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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33 | n0: 2161 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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34 | n1: 1192 0x8050AEB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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35 | n0: 1192 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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36 | n1: 4052 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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37 | n1: 4052 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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38 | n0: 4052 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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39 | n1: 746 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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40 | n0: 746 in 9 places, all below massif's threshold (01.00%) |
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41 | n1: 352 0x40AC00D: __fopen_internal (iofopen.c:76) |
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42 | n2: 352 0x40AC0DA: fopen@@GLIBC_2.1 (iofopen.c:107) |
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43 | n1: 352 0x80509ED: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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44 | n0: 352 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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45 | n0: 0 in 3 places, all below massif's threshold (01.00%) |
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46 | n1: 224 0x40DACC5: __tzfile_read (tzfile.c:257) |
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47 | n1: 224 0x40DA026: tzset_internal (tzset.c:439) |
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48 | n1: 224 0x40DA12F: __tz_convert (tzset.c:624) |
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49 | n1: 224 0x40D882D: localtime (localtime.c:43) |
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50 | n1: 224 0x40D871F: ctime (ctime.c:32) |
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51 | n1: 224 0x8065FC1: logInstructions (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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52 | n0: 224 0x8053EF3: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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53 | n0: 53 in 2 places, all below massif's threshold (01.00%) |
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54 | #----------- |
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55 | snapshot=3 |
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56 | #----------- |
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57 | time=2817140 |
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58 | mem_heap_B=13115 |
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59 | mem_heap_extra_B=981 |
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60 | mem_stacks_B=0 |
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61 | heap_tree=empty |
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62 | #----------- |
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63 | snapshot=4 |
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64 | #----------- |
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65 | time=4403733 |
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66 | mem_heap_B=21037 |
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67 | mem_heap_extra_B=1659 |
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68 | mem_stacks_B=0 |
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69 | heap_tree=empty |
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70 | #----------- |
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71 | snapshot=5 |
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72 | #----------- |
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73 | time=5504103 |
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74 | mem_heap_B=23661 |
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75 | mem_heap_extra_B=2019 |
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76 | mem_stacks_B=0 |
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77 | heap_tree=detailed |
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78 | n5: 23661 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. |
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79 | n3: 14182 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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80 | n1: 6517 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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81 | n0: 6517 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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82 | n1: 6473 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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83 | n0: 6473 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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84 | n1: 1192 0x8050AEB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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85 | n0: 1192 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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86 | n1: 8104 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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87 | n1: 8104 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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88 | n0: 8104 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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89 | n1: 746 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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90 | n0: 746 in 9 places, all below massif's threshold (01.00%) |
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91 | n1: 352 0x40AC00D: __fopen_internal (iofopen.c:76) |
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92 | n2: 352 0x40AC0DA: fopen@@GLIBC_2.1 (iofopen.c:107) |
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93 | n1: 352 0x80509ED: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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94 | n0: 352 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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95 | n0: 0 in 3 places, all below massif's threshold (01.00%) |
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96 | n0: 277 in 3 places, all below massif's threshold (01.00%) |
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97 | #----------- |
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98 | snapshot=6 |
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99 | #----------- |
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100 | time=7120717 |
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101 | mem_heap_B=31613 |
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102 | mem_heap_extra_B=2691 |
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103 | mem_stacks_B=0 |
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104 | heap_tree=detailed |
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105 | n5: 31613 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. |
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106 | n3: 18082 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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107 | n1: 8476 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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108 | n0: 8476 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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109 | n1: 8414 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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110 | n0: 8414 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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111 | n1: 1192 0x8050AEB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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112 | n0: 1192 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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113 | n1: 12156 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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114 | n1: 12156 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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115 | n0: 12156 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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116 | n1: 746 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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117 | n0: 746 in 9 places, all below massif's threshold (01.00%) |
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118 | n1: 352 0x40AC00D: __fopen_internal (iofopen.c:76) |
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119 | n2: 352 0x40AC0DA: fopen@@GLIBC_2.1 (iofopen.c:107) |
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120 | n1: 352 0x80509ED: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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121 | n0: 352 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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122 | n0: 0 in 3 places, all below massif's threshold (01.00%) |
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123 | n0: 277 in 3 places, all below massif's threshold (01.00%) |
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124 | #----------- |
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125 | snapshot=7 |
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126 | #----------- |
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127 | time=8839291 |
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128 | mem_heap_B=39657 |
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129 | mem_heap_extra_B=3535 |
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130 | mem_stacks_B=0 |
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131 | heap_tree=empty |
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132 | #----------- |
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133 | snapshot=8 |
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134 | #----------- |
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135 | time=10439593 |
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136 | mem_heap_B=47375 |
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137 | mem_heap_extra_B=4425 |
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138 | mem_stacks_B=0 |
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139 | heap_tree=empty |
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140 | #----------- |
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141 | snapshot=9 |
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142 | #----------- |
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143 | time=11568907 |
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144 | mem_heap_B=49873 |
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145 | mem_heap_extra_B=5127 |
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146 | mem_stacks_B=0 |
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147 | heap_tree=empty |
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148 | #----------- |
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149 | snapshot=10 |
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150 | #----------- |
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151 | time=12346601 |
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152 | mem_heap_B=55651 |
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153 | mem_heap_extra_B=5645 |
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154 | mem_stacks_B=0 |
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155 | heap_tree=empty |
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156 | #----------- |
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157 | snapshot=11 |
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158 | #----------- |
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159 | time=13737728 |
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160 | mem_heap_B=62752 |
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161 | mem_heap_extra_B=6520 |
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162 | mem_stacks_B=0 |
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163 | heap_tree=empty |
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164 | #----------- |
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165 | snapshot=12 |
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166 | #----------- |
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167 | time=14918262 |
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168 | mem_heap_B=72381 |
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169 | mem_heap_extra_B=7883 |
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170 | mem_stacks_B=0 |
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171 | heap_tree=empty |
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172 | #----------- |
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173 | snapshot=13 |
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174 | #----------- |
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175 | time=16778194 |
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176 | mem_heap_B=78701 |
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177 | mem_heap_extra_B=9891 |
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178 | mem_stacks_B=0 |
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179 | heap_tree=empty |
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180 | #----------- |
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181 | snapshot=14 |
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182 | #----------- |
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183 | time=18107144 |
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184 | mem_heap_B=83491 |
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185 | mem_heap_extra_B=10845 |
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186 | mem_stacks_B=0 |
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187 | heap_tree=detailed |
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188 | n4: 83491 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. |
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189 | n5: 39388 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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190 | n1: 16718 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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191 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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192 | n1: 16718 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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193 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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194 | n1: 2380 0x8051997: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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195 | n0: 2380 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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196 | n1: 2380 0x80519BF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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197 | n0: 2380 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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198 | n1: 1192 0x8050AEB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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199 | n0: 1192 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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200 | n2: 30408 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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201 | n1: 28364 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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202 | n0: 28364 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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203 | n1: 2044 0x804AC5F: allocateArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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204 | n1: 2044 0x804D3B3: createArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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205 | n1: 2044 0x80515AD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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206 | n0: 2044 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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207 | n2: 13066 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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208 | n1: 12300 0x80518BD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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209 | n0: 12300 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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210 | n0: 766 in 9 places, all below massif's threshold (01.00%) |
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211 | n0: 629 in 4 places, all below massif's threshold (01.00%) |
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212 | #----------- |
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213 | snapshot=15 |
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214 | #----------- |
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215 | time=18941183 |
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216 | mem_heap_B=86361 |
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217 | mem_heap_extra_B=11679 |
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218 | mem_stacks_B=0 |
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219 | heap_tree=empty |
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220 | #----------- |
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221 | snapshot=16 |
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222 | #----------- |
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223 | time=20229339 |
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224 | mem_heap_B=90501 |
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225 | mem_heap_extra_B=13403 |
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226 | mem_stacks_B=0 |
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227 | heap_tree=detailed |
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228 | n4: 90501 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. |
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229 | n5: 39388 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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230 | n1: 16718 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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231 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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232 | n1: 16718 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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233 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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234 | n1: 2380 0x8051997: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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235 | n0: 2380 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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236 | n1: 2380 0x80519BF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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237 | n0: 2380 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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238 | n1: 1192 0x8050AEB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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239 | n0: 1192 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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240 | n2: 30408 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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241 | n1: 28364 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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242 | n0: 28364 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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243 | n1: 2044 0x804AC5F: allocateArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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244 | n1: 2044 0x804D3B3: createArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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245 | n1: 2044 0x80515AD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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246 | n0: 2044 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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247 | n2: 20076 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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248 | n1: 19310 0x80518BD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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249 | n0: 19310 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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250 | n0: 766 in 9 places, all below massif's threshold (01.00%) |
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251 | n0: 629 in 4 places, all below massif's threshold (01.00%) |
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252 | #----------- |
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253 | snapshot=17 |
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254 | #----------- |
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255 | time=22425236 |
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256 | mem_heap_B=90189 |
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257 | mem_heap_extra_B=13403 |
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258 | mem_stacks_B=0 |
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259 | heap_tree=empty |
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260 | #----------- |
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261 | snapshot=18 |
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262 | #----------- |
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263 | time=23728723 |
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264 | mem_heap_B=151544 |
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265 | mem_heap_extra_B=18648 |
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266 | mem_stacks_B=0 |
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267 | heap_tree=empty |
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268 | #----------- |
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269 | snapshot=19 |
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270 | #----------- |
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271 | time=25512801 |
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272 | mem_heap_B=221629 |
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273 | mem_heap_extra_B=25603 |
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274 | mem_stacks_B=0 |
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275 | heap_tree=empty |
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276 | #----------- |
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277 | snapshot=20 |
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278 | #----------- |
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279 | time=26701745 |
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280 | mem_heap_B=268431 |
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281 | mem_heap_extra_B=29633 |
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282 | mem_stacks_B=0 |
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283 | heap_tree=empty |
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284 | #----------- |
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285 | snapshot=21 |
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286 | #----------- |
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287 | time=27890905 |
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288 | mem_heap_B=315247 |
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289 | mem_heap_extra_B=33505 |
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290 | mem_stacks_B=0 |
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291 | heap_tree=empty |
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292 | #----------- |
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293 | snapshot=22 |
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294 | #----------- |
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295 | time=29135696 |
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296 | mem_heap_B=364324 |
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297 | mem_heap_extra_B=37564 |
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298 | mem_stacks_B=0 |
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299 | heap_tree=detailed |
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300 | n4: 364324 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. |
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301 | n3: 283859 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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302 | n1: 263650 0x8066429: importReadSet (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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303 | n0: 263650 0x80553C1: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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304 | n1: 19310 0x80518BD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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305 | n0: 19310 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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306 | n0: 899 in 10 places, all below massif's threshold (01.00%) |
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307 | n4: 49428 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
308 | n1: 16718 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
309 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
310 | n1: 16718 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
311 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
312 | n1: 8000 0x80662CE: importReadSet (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
313 | n0: 8000 0x80553C1: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
314 | n0: 7992 in 5 places, all below massif's threshold (01.00%) |
---|
315 | n2: 30408 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
316 | n1: 28364 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
317 | n0: 28364 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
318 | n0: 2044 in 1 place, below massif's threshold (01.00%) |
---|
319 | n0: 629 in 4 places, all below massif's threshold (01.00%) |
---|
320 | #----------- |
---|
321 | snapshot=23 |
---|
322 | #----------- |
---|
323 | time=33307931 |
---|
324 | mem_heap_B=363972 |
---|
325 | mem_heap_extra_B=37556 |
---|
326 | mem_stacks_B=0 |
---|
327 | heap_tree=empty |
---|
328 | #----------- |
---|
329 | snapshot=24 |
---|
330 | #----------- |
---|
331 | time=34366455 |
---|
332 | mem_heap_B=396511 |
---|
333 | mem_heap_extra_B=34081 |
---|
334 | mem_stacks_B=0 |
---|
335 | heap_tree=empty |
---|
336 | #----------- |
---|
337 | snapshot=25 |
---|
338 | #----------- |
---|
339 | time=35558415 |
---|
340 | mem_heap_B=351447 |
---|
341 | mem_heap_extra_B=29609 |
---|
342 | mem_stacks_B=0 |
---|
343 | heap_tree=empty |
---|
344 | #----------- |
---|
345 | snapshot=26 |
---|
346 | #----------- |
---|
347 | time=36750375 |
---|
348 | mem_heap_B=306383 |
---|
349 | mem_heap_extra_B=25137 |
---|
350 | mem_stacks_B=0 |
---|
351 | heap_tree=empty |
---|
352 | #----------- |
---|
353 | snapshot=27 |
---|
354 | #----------- |
---|
355 | time=37942335 |
---|
356 | mem_heap_B=260736 |
---|
357 | mem_heap_extra_B=21248 |
---|
358 | mem_stacks_B=0 |
---|
359 | heap_tree=empty |
---|
360 | #----------- |
---|
361 | snapshot=28 |
---|
362 | #----------- |
---|
363 | time=39134295 |
---|
364 | mem_heap_B=214984 |
---|
365 | mem_heap_extra_B=17464 |
---|
366 | mem_stacks_B=0 |
---|
367 | heap_tree=empty |
---|
368 | #----------- |
---|
369 | snapshot=29 |
---|
370 | #----------- |
---|
371 | time=40661243 |
---|
372 | mem_heap_B=160439 |
---|
373 | mem_heap_extra_B=13449 |
---|
374 | mem_stacks_B=0 |
---|
375 | heap_tree=empty |
---|
376 | #----------- |
---|
377 | snapshot=30 |
---|
378 | #----------- |
---|
379 | time=42149046 |
---|
380 | mem_heap_B=2372741 |
---|
381 | mem_heap_extra_B=14443 |
---|
382 | mem_stacks_B=0 |
---|
383 | heap_tree=peak |
---|
384 | n4: 2372741 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. |
---|
385 | n3: 2127556 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
386 | n1: 2097148 0x806E23B: expandLongNode (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
387 | n1: 2097148 0x806E94F: exploitShortReadPairs (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
388 | n0: 2097148 0x80543B6: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
389 | n1: 28364 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
390 | n0: 28364 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
391 | n0: 2044 in 1 place, below massif's threshold (01.00%) |
---|
392 | n3: 185260 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
393 | n1: 81608 0x80733FF: prepareGraphForLocalCorrections (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
394 | n1: 81608 0x806E8C8: exploitShortReadPairs (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
395 | n0: 81608 0x80543B6: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
396 | n0: 53652 in 26 places, all below massif's threshold (01.00%) |
---|
397 | n1: 50000 0x8049A05: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
398 | n1: 50000 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
399 | n0: 50000 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
400 | n1: 53672 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
401 | n0: 53672 in 18 places, all below massif's threshold (01.00%) |
---|
402 | n0: 6253 in 6 places, all below massif's threshold (01.00%) |
---|
403 | #----------- |
---|
404 | snapshot=31 |
---|
405 | #----------- |
---|
406 | time=43169494 |
---|
407 | mem_heap_B=168011 |
---|
408 | mem_heap_extra_B=13485 |
---|
409 | mem_stacks_B=0 |
---|
410 | heap_tree=empty |
---|
411 | #----------- |
---|
412 | snapshot=32 |
---|
413 | #----------- |
---|
414 | time=44859167 |
---|
415 | mem_heap_B=168011 |
---|
416 | mem_heap_extra_B=13485 |
---|
417 | mem_stacks_B=0 |
---|
418 | heap_tree=empty |
---|
419 | #----------- |
---|
420 | snapshot=33 |
---|
421 | #----------- |
---|
422 | time=45917389 |
---|
423 | mem_heap_B=168011 |
---|
424 | mem_heap_extra_B=13485 |
---|
425 | mem_stacks_B=0 |
---|
426 | heap_tree=empty |
---|
427 | #----------- |
---|
428 | snapshot=34 |
---|
429 | #----------- |
---|
430 | time=46999637 |
---|
431 | mem_heap_B=168011 |
---|
432 | mem_heap_extra_B=13485 |
---|
433 | mem_stacks_B=0 |
---|
434 | heap_tree=empty |
---|
435 | #----------- |
---|
436 | snapshot=35 |
---|
437 | #----------- |
---|
438 | time=48799821 |
---|
439 | mem_heap_B=168011 |
---|
440 | mem_heap_extra_B=13485 |
---|
441 | mem_stacks_B=0 |
---|
442 | heap_tree=empty |
---|
443 | #----------- |
---|
444 | snapshot=36 |
---|
445 | #----------- |
---|
446 | time=50410765 |
---|
447 | mem_heap_B=168011 |
---|
448 | mem_heap_extra_B=13485 |
---|
449 | mem_stacks_B=0 |
---|
450 | heap_tree=empty |
---|
451 | #----------- |
---|
452 | snapshot=37 |
---|
453 | #----------- |
---|
454 | time=51544977 |
---|
455 | mem_heap_B=168011 |
---|
456 | mem_heap_extra_B=13485 |
---|
457 | mem_stacks_B=0 |
---|
458 | heap_tree=empty |
---|
459 | #----------- |
---|
460 | snapshot=38 |
---|
461 | #----------- |
---|
462 | time=52624316 |
---|
463 | mem_heap_B=168011 |
---|
464 | mem_heap_extra_B=13485 |
---|
465 | mem_stacks_B=0 |
---|
466 | heap_tree=empty |
---|
467 | #----------- |
---|
468 | snapshot=39 |
---|
469 | #----------- |
---|
470 | time=53432410 |
---|
471 | mem_heap_B=168011 |
---|
472 | mem_heap_extra_B=13485 |
---|
473 | mem_stacks_B=0 |
---|
474 | heap_tree=empty |
---|
475 | #----------- |
---|
476 | snapshot=40 |
---|
477 | #----------- |
---|
478 | time=54949668 |
---|
479 | mem_heap_B=168011 |
---|
480 | mem_heap_extra_B=13485 |
---|
481 | mem_stacks_B=0 |
---|
482 | heap_tree=empty |
---|
483 | #----------- |
---|
484 | snapshot=41 |
---|
485 | #----------- |
---|
486 | time=56339363 |
---|
487 | mem_heap_B=168011 |
---|
488 | mem_heap_extra_B=13485 |
---|
489 | mem_stacks_B=0 |
---|
490 | heap_tree=empty |
---|
491 | #----------- |
---|
492 | snapshot=42 |
---|
493 | #----------- |
---|
494 | time=57550113 |
---|
495 | mem_heap_B=168011 |
---|
496 | mem_heap_extra_B=13485 |
---|
497 | mem_stacks_B=0 |
---|
498 | heap_tree=detailed |
---|
499 | n5: 168011 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. |
---|
500 | n5: 85726 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
501 | n1: 50000 0x8049A05: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
502 | n1: 50000 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
503 | n0: 50000 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
504 | n1: 16718 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
505 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
506 | n1: 16718 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
507 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
508 | n1: 2000 0x80662E8: importReadSet (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
509 | n0: 2000 0x80553C1: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
510 | n0: 290 in 24 places, all below massif's threshold (01.00%) |
---|
511 | n4: 44104 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
512 | n1: 19310 0x80518BD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
513 | n0: 19310 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
514 | n1: 16000 0x80499A2: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
515 | n1: 16000 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
516 | n0: 16000 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
517 | n1: 8000 0x8065E35: createReadPairingArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
518 | n0: 8000 0x8054341: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
519 | n0: 794 in 15 places, all below massif's threshold (01.00%) |
---|
520 | n3: 30408 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
521 | n1: 28364 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
522 | n0: 28364 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
523 | n1: 2044 0x804AC5F: allocateArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
524 | n1: 2044 0x804D3B3: createArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
525 | n1: 2044 0x80515AD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
526 | n0: 2044 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
527 | n0: 0 in 1 place, below massif's threshold (01.00%) |
---|
528 | n3: 7144 0x807D20A: reallocOrExit4 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
529 | n0: 2384 in 2 places, all below massif's threshold (01.00%) |
---|
530 | n2: 2380 0x804C7D7: renumberNodes (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
531 | n2: 2380 0x80570DB: concatenateGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
532 | n0: 2380 0x80543FE: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
533 | n0: 0 in 4 places, all below massif's threshold (01.00%) |
---|
534 | n0: 0 in 1 place, below massif's threshold (01.00%) |
---|
535 | n2: 2380 0x804C800: renumberNodes (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
536 | n2: 2380 0x80570DB: concatenateGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
537 | n0: 2380 0x80543FE: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
538 | n0: 0 in 4 places, all below massif's threshold (01.00%) |
---|
539 | n0: 0 in 1 place, below massif's threshold (01.00%) |
---|
540 | n0: 629 in 5 places, all below massif's threshold (01.00%) |
---|
541 | #----------- |
---|
542 | snapshot=43 |
---|
543 | #----------- |
---|
544 | time=58521602 |
---|
545 | mem_heap_B=168011 |
---|
546 | mem_heap_extra_B=13485 |
---|
547 | mem_stacks_B=0 |
---|
548 | heap_tree=empty |
---|
549 | #----------- |
---|
550 | snapshot=44 |
---|
551 | #----------- |
---|
552 | time=60387230 |
---|
553 | mem_heap_B=168011 |
---|
554 | mem_heap_extra_B=13485 |
---|
555 | mem_stacks_B=0 |
---|
556 | heap_tree=empty |
---|
557 | #----------- |
---|
558 | snapshot=45 |
---|
559 | #----------- |
---|
560 | time=61774807 |
---|
561 | mem_heap_B=168011 |
---|
562 | mem_heap_extra_B=13485 |
---|
563 | mem_stacks_B=0 |
---|
564 | heap_tree=empty |
---|
565 | #----------- |
---|
566 | snapshot=46 |
---|
567 | #----------- |
---|
568 | time=62663796 |
---|
569 | mem_heap_B=168011 |
---|
570 | mem_heap_extra_B=13485 |
---|
571 | mem_stacks_B=0 |
---|
572 | heap_tree=empty |
---|
573 | #----------- |
---|
574 | snapshot=47 |
---|
575 | #----------- |
---|
576 | time=63734787 |
---|
577 | mem_heap_B=168011 |
---|
578 | mem_heap_extra_B=13485 |
---|
579 | mem_stacks_B=0 |
---|
580 | heap_tree=empty |
---|
581 | #----------- |
---|
582 | snapshot=48 |
---|
583 | #----------- |
---|
584 | time=65581286 |
---|
585 | mem_heap_B=168011 |
---|
586 | mem_heap_extra_B=13485 |
---|
587 | mem_stacks_B=0 |
---|
588 | heap_tree=empty |
---|
589 | #----------- |
---|
590 | snapshot=49 |
---|
591 | #----------- |
---|
592 | time=67173391 |
---|
593 | mem_heap_B=168011 |
---|
594 | mem_heap_extra_B=13485 |
---|
595 | mem_stacks_B=0 |
---|
596 | heap_tree=empty |
---|
597 | #----------- |
---|
598 | snapshot=50 |
---|
599 | #----------- |
---|
600 | time=67996600 |
---|
601 | mem_heap_B=168011 |
---|
602 | mem_heap_extra_B=13485 |
---|
603 | mem_stacks_B=0 |
---|
604 | heap_tree=empty |
---|
605 | #----------- |
---|
606 | snapshot=51 |
---|
607 | #----------- |
---|
608 | time=68861240 |
---|
609 | mem_heap_B=168011 |
---|
610 | mem_heap_extra_B=13485 |
---|
611 | mem_stacks_B=0 |
---|
612 | heap_tree=empty |
---|
613 | #----------- |
---|
614 | snapshot=52 |
---|
615 | #----------- |
---|
616 | time=69870635 |
---|
617 | mem_heap_B=168011 |
---|
618 | mem_heap_extra_B=13485 |
---|
619 | mem_stacks_B=0 |
---|
620 | heap_tree=empty |
---|
621 | #----------- |
---|
622 | snapshot=53 |
---|
623 | #----------- |
---|
624 | time=70745259 |
---|
625 | mem_heap_B=168011 |
---|
626 | mem_heap_extra_B=13485 |
---|
627 | mem_stacks_B=0 |
---|
628 | heap_tree=empty |
---|
629 | #----------- |
---|
630 | snapshot=54 |
---|
631 | #----------- |
---|
632 | time=71733159 |
---|
633 | mem_heap_B=168011 |
---|
634 | mem_heap_extra_B=13485 |
---|
635 | mem_stacks_B=0 |
---|
636 | heap_tree=empty |
---|
637 | #----------- |
---|
638 | snapshot=55 |
---|
639 | #----------- |
---|
640 | time=72563529 |
---|
641 | mem_heap_B=168011 |
---|
642 | mem_heap_extra_B=13485 |
---|
643 | mem_stacks_B=0 |
---|
644 | heap_tree=empty |
---|
645 | #----------- |
---|
646 | snapshot=56 |
---|
647 | #----------- |
---|
648 | time=73462422 |
---|
649 | mem_heap_B=168011 |
---|
650 | mem_heap_extra_B=13485 |
---|
651 | mem_stacks_B=0 |
---|
652 | heap_tree=empty |
---|
653 | #----------- |
---|
654 | snapshot=57 |
---|
655 | #----------- |
---|
656 | time=74361033 |
---|
657 | mem_heap_B=168011 |
---|
658 | mem_heap_extra_B=13485 |
---|
659 | mem_stacks_B=0 |
---|
660 | heap_tree=empty |
---|
661 | #----------- |
---|
662 | snapshot=58 |
---|
663 | #----------- |
---|
664 | time=75174852 |
---|
665 | mem_heap_B=168011 |
---|
666 | mem_heap_extra_B=13485 |
---|
667 | mem_stacks_B=0 |
---|
668 | heap_tree=detailed |
---|
669 | n5: 168011 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. |
---|
670 | n5: 85726 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
671 | n1: 50000 0x8049A05: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
672 | n1: 50000 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
673 | n0: 50000 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
674 | n1: 16718 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
675 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
676 | n1: 16718 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
677 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
678 | n1: 2000 0x80662E8: importReadSet (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
679 | n0: 2000 0x80553C1: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
680 | n0: 290 in 24 places, all below massif's threshold (01.00%) |
---|
681 | n4: 44104 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
682 | n1: 19310 0x80518BD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
683 | n0: 19310 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
684 | n1: 16000 0x80499A2: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
685 | n1: 16000 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
686 | n0: 16000 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
687 | n1: 8000 0x8065E35: createReadPairingArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
688 | n0: 8000 0x8054341: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
689 | n0: 794 in 15 places, all below massif's threshold (01.00%) |
---|
690 | n3: 30408 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
691 | n1: 28364 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
692 | n0: 28364 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
693 | n1: 2044 0x804AC5F: allocateArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
694 | n1: 2044 0x804D3B3: createArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
695 | n1: 2044 0x80515AD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
696 | n0: 2044 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
697 | n0: 0 in 1 place, below massif's threshold (01.00%) |
---|
698 | n3: 7144 0x807D20A: reallocOrExit4 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
699 | n0: 2384 in 2 places, all below massif's threshold (01.00%) |
---|
700 | n2: 2380 0x804C7D7: renumberNodes (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
701 | n2: 2380 0x80570DB: concatenateGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
702 | n0: 2380 0x80543FE: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
703 | n0: 0 in 4 places, all below massif's threshold (01.00%) |
---|
704 | n0: 0 in 1 place, below massif's threshold (01.00%) |
---|
705 | n2: 2380 0x804C800: renumberNodes (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
706 | n2: 2380 0x80570DB: concatenateGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
707 | n0: 2380 0x80543FE: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
708 | n0: 0 in 4 places, all below massif's threshold (01.00%) |
---|
709 | n0: 0 in 1 place, below massif's threshold (01.00%) |
---|
710 | n0: 629 in 5 places, all below massif's threshold (01.00%) |
---|
711 | #----------- |
---|
712 | snapshot=59 |
---|
713 | #----------- |
---|
714 | time=75990778 |
---|
715 | mem_heap_B=168011 |
---|
716 | mem_heap_extra_B=13485 |
---|
717 | mem_stacks_B=0 |
---|
718 | heap_tree=empty |
---|
719 | #----------- |
---|
720 | snapshot=60 |
---|
721 | #----------- |
---|
722 | time=76839553 |
---|
723 | mem_heap_B=168011 |
---|
724 | mem_heap_extra_B=13485 |
---|
725 | mem_stacks_B=0 |
---|
726 | heap_tree=empty |
---|
727 | #----------- |
---|
728 | snapshot=61 |
---|
729 | #----------- |
---|
730 | time=77732760 |
---|
731 | mem_heap_B=168011 |
---|
732 | mem_heap_extra_B=13485 |
---|
733 | mem_stacks_B=0 |
---|
734 | heap_tree=empty |
---|
735 | #----------- |
---|
736 | snapshot=62 |
---|
737 | #----------- |
---|
738 | time=78569147 |
---|
739 | mem_heap_B=168011 |
---|
740 | mem_heap_extra_B=13485 |
---|
741 | mem_stacks_B=0 |
---|
742 | heap_tree=empty |
---|
743 | #----------- |
---|
744 | snapshot=63 |
---|
745 | #----------- |
---|
746 | time=79491072 |
---|
747 | mem_heap_B=168011 |
---|
748 | mem_heap_extra_B=13485 |
---|
749 | mem_stacks_B=0 |
---|
750 | heap_tree=empty |
---|
751 | #----------- |
---|
752 | snapshot=64 |
---|
753 | #----------- |
---|
754 | time=80275205 |
---|
755 | mem_heap_B=168011 |
---|
756 | mem_heap_extra_B=13485 |
---|
757 | mem_stacks_B=0 |
---|
758 | heap_tree=empty |
---|
759 | #----------- |
---|
760 | snapshot=65 |
---|
761 | #----------- |
---|
762 | time=81085261 |
---|
763 | mem_heap_B=168011 |
---|
764 | mem_heap_extra_B=13485 |
---|
765 | mem_stacks_B=0 |
---|
766 | heap_tree=empty |
---|
767 | #----------- |
---|
768 | snapshot=66 |
---|
769 | #----------- |
---|
770 | time=81905767 |
---|
771 | mem_heap_B=168011 |
---|
772 | mem_heap_extra_B=13485 |
---|
773 | mem_stacks_B=0 |
---|
774 | heap_tree=empty |
---|
775 | #----------- |
---|
776 | snapshot=67 |
---|
777 | #----------- |
---|
778 | time=82701841 |
---|
779 | mem_heap_B=168011 |
---|
780 | mem_heap_extra_B=13485 |
---|
781 | mem_stacks_B=0 |
---|
782 | heap_tree=empty |
---|
783 | #----------- |
---|
784 | snapshot=68 |
---|
785 | #----------- |
---|
786 | time=83704805 |
---|
787 | mem_heap_B=168011 |
---|
788 | mem_heap_extra_B=13485 |
---|
789 | mem_stacks_B=0 |
---|
790 | heap_tree=detailed |
---|
791 | n5: 168011 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. |
---|
792 | n5: 85726 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
793 | n1: 50000 0x8049A05: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
794 | n1: 50000 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
795 | n0: 50000 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
796 | n1: 16718 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
797 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
798 | n1: 16718 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
799 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
800 | n1: 2000 0x80662E8: importReadSet (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
801 | n0: 2000 0x80553C1: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
802 | n0: 290 in 24 places, all below massif's threshold (01.00%) |
---|
803 | n4: 44104 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
804 | n1: 19310 0x80518BD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
805 | n0: 19310 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
806 | n1: 16000 0x80499A2: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
807 | n1: 16000 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
808 | n0: 16000 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
809 | n1: 8000 0x8065E35: createReadPairingArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
810 | n0: 8000 0x8054341: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
811 | n0: 794 in 15 places, all below massif's threshold (01.00%) |
---|
812 | n3: 30408 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
813 | n1: 28364 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
814 | n0: 28364 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
815 | n1: 2044 0x804AC5F: allocateArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
816 | n1: 2044 0x804D3B3: createArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
817 | n1: 2044 0x80515AD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
818 | n0: 2044 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
819 | n0: 0 in 1 place, below massif's threshold (01.00%) |
---|
820 | n3: 7144 0x807D20A: reallocOrExit4 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
821 | n0: 2384 in 2 places, all below massif's threshold (01.00%) |
---|
822 | n2: 2380 0x804C7D7: renumberNodes (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
823 | n2: 2380 0x80570DB: concatenateGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
824 | n0: 2380 0x80543FE: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
825 | n0: 0 in 4 places, all below massif's threshold (01.00%) |
---|
826 | n0: 0 in 1 place, below massif's threshold (01.00%) |
---|
827 | n2: 2380 0x804C800: renumberNodes (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
828 | n2: 2380 0x80570DB: concatenateGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
829 | n0: 2380 0x80543FE: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
---|
830 | n0: 0 in 4 places, all below massif's threshold (01.00%) |
---|
831 | n0: 0 in 1 place, below massif's threshold (01.00%) |
---|
832 | n0: 629 in 5 places, all below massif's threshold (01.00%) |
---|
833 | #----------- |
---|
834 | snapshot=69 |
---|
835 | #----------- |
---|
836 | time=84516428 |
---|
837 | mem_heap_B=168011 |
---|
838 | mem_heap_extra_B=13485 |
---|
839 | mem_stacks_B=0 |
---|
840 | heap_tree=empty |
---|
841 | #----------- |
---|
842 | snapshot=70 |
---|
843 | #----------- |
---|
844 | time=85307941 |
---|
845 | mem_heap_B=168011 |
---|
846 | mem_heap_extra_B=13485 |
---|
847 | mem_stacks_B=0 |
---|
848 | heap_tree=empty |
---|
849 | #----------- |
---|
850 | snapshot=71 |
---|
851 | #----------- |
---|
852 | time=89232699 |
---|
853 | mem_heap_B=167651 |
---|
854 | mem_heap_extra_B=13469 |
---|
855 | mem_stacks_B=0 |
---|
856 | heap_tree=empty |
---|
857 | #----------- |
---|
858 | snapshot=72 |
---|
859 | #----------- |
---|
860 | time=131622888 |
---|
861 | mem_heap_B=167651 |
---|
862 | mem_heap_extra_B=13469 |
---|
863 | mem_stacks_B=0 |
---|
864 | heap_tree=empty |
---|