| 1 | desc: (none) |
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| 2 | cmd: ./velvetg output/ -exp_cov 3 -min_contig_lgth 100 |
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| 3 | time_unit: i |
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| 4 | #----------- |
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| 5 | snapshot=0 |
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| 6 | #----------- |
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| 7 | time=0 |
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| 8 | mem_heap_B=0 |
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| 9 | mem_heap_extra_B=0 |
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| 10 | mem_stacks_B=0 |
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| 11 | heap_tree=empty |
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| 12 | #----------- |
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| 13 | snapshot=1 |
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| 14 | #----------- |
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| 15 | time=896153 |
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| 16 | mem_heap_B=8478 |
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| 17 | mem_heap_extra_B=410 |
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| 18 | mem_stacks_B=0 |
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| 19 | heap_tree=empty |
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| 20 | #----------- |
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| 21 | snapshot=2 |
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| 22 | #----------- |
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| 23 | time=1973156 |
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| 24 | mem_heap_B=11099 |
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| 25 | mem_heap_extra_B=773 |
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| 26 | mem_stacks_B=0 |
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| 27 | heap_tree=detailed |
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| 28 | n6: 11099 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. |
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| 29 | n3: 5672 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 30 | n1: 2319 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 31 | n0: 2319 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 32 | n1: 2161 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 33 | n0: 2161 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 34 | n1: 1192 0x8050AEB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 35 | n0: 1192 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 36 | n1: 4052 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 37 | n1: 4052 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 38 | n0: 4052 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 39 | n1: 746 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 40 | n0: 746 in 9 places, all below massif's threshold (01.00%) |
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| 41 | n1: 352 0x40AC00D: __fopen_internal (iofopen.c:76) |
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| 42 | n2: 352 0x40AC0DA: fopen@@GLIBC_2.1 (iofopen.c:107) |
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| 43 | n1: 352 0x80509ED: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 44 | n0: 352 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 45 | n0: 0 in 3 places, all below massif's threshold (01.00%) |
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| 46 | n1: 224 0x40DACC5: __tzfile_read (tzfile.c:257) |
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| 47 | n1: 224 0x40DA026: tzset_internal (tzset.c:439) |
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| 48 | n1: 224 0x40DA12F: __tz_convert (tzset.c:624) |
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| 49 | n1: 224 0x40D882D: localtime (localtime.c:43) |
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| 50 | n1: 224 0x40D871F: ctime (ctime.c:32) |
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| 51 | n1: 224 0x8065FC1: logInstructions (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 52 | n0: 224 0x8053EF3: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 53 | n0: 53 in 2 places, all below massif's threshold (01.00%) |
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| 54 | #----------- |
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| 55 | snapshot=3 |
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| 56 | #----------- |
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| 57 | time=2817140 |
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| 58 | mem_heap_B=13115 |
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| 59 | mem_heap_extra_B=981 |
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| 60 | mem_stacks_B=0 |
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| 61 | heap_tree=empty |
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| 62 | #----------- |
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| 63 | snapshot=4 |
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| 64 | #----------- |
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| 65 | time=4403733 |
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| 66 | mem_heap_B=21037 |
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| 67 | mem_heap_extra_B=1659 |
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| 68 | mem_stacks_B=0 |
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| 69 | heap_tree=empty |
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| 70 | #----------- |
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| 71 | snapshot=5 |
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| 72 | #----------- |
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| 73 | time=5504103 |
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| 74 | mem_heap_B=23661 |
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| 75 | mem_heap_extra_B=2019 |
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| 76 | mem_stacks_B=0 |
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| 77 | heap_tree=detailed |
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| 78 | n5: 23661 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. |
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| 79 | n3: 14182 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 80 | n1: 6517 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 81 | n0: 6517 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 82 | n1: 6473 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 83 | n0: 6473 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 84 | n1: 1192 0x8050AEB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 85 | n0: 1192 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 86 | n1: 8104 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 87 | n1: 8104 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 88 | n0: 8104 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 89 | n1: 746 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 90 | n0: 746 in 9 places, all below massif's threshold (01.00%) |
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| 91 | n1: 352 0x40AC00D: __fopen_internal (iofopen.c:76) |
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| 92 | n2: 352 0x40AC0DA: fopen@@GLIBC_2.1 (iofopen.c:107) |
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| 93 | n1: 352 0x80509ED: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 94 | n0: 352 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 95 | n0: 0 in 3 places, all below massif's threshold (01.00%) |
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| 96 | n0: 277 in 3 places, all below massif's threshold (01.00%) |
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| 97 | #----------- |
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| 98 | snapshot=6 |
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| 99 | #----------- |
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| 100 | time=7120717 |
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| 101 | mem_heap_B=31613 |
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| 102 | mem_heap_extra_B=2691 |
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| 103 | mem_stacks_B=0 |
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| 104 | heap_tree=detailed |
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| 105 | n5: 31613 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. |
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| 106 | n3: 18082 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 107 | n1: 8476 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 108 | n0: 8476 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 109 | n1: 8414 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 110 | n0: 8414 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 111 | n1: 1192 0x8050AEB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 112 | n0: 1192 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 113 | n1: 12156 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 114 | n1: 12156 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 115 | n0: 12156 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 116 | n1: 746 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 117 | n0: 746 in 9 places, all below massif's threshold (01.00%) |
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| 118 | n1: 352 0x40AC00D: __fopen_internal (iofopen.c:76) |
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| 119 | n2: 352 0x40AC0DA: fopen@@GLIBC_2.1 (iofopen.c:107) |
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| 120 | n1: 352 0x80509ED: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 121 | n0: 352 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 122 | n0: 0 in 3 places, all below massif's threshold (01.00%) |
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| 123 | n0: 277 in 3 places, all below massif's threshold (01.00%) |
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| 124 | #----------- |
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| 125 | snapshot=7 |
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| 126 | #----------- |
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| 127 | time=8839291 |
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| 128 | mem_heap_B=39657 |
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| 129 | mem_heap_extra_B=3535 |
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| 130 | mem_stacks_B=0 |
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| 131 | heap_tree=empty |
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| 132 | #----------- |
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| 133 | snapshot=8 |
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| 134 | #----------- |
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| 135 | time=10439593 |
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| 136 | mem_heap_B=47375 |
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| 137 | mem_heap_extra_B=4425 |
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| 138 | mem_stacks_B=0 |
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| 139 | heap_tree=empty |
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| 140 | #----------- |
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| 141 | snapshot=9 |
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| 142 | #----------- |
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| 143 | time=11568907 |
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| 144 | mem_heap_B=49873 |
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| 145 | mem_heap_extra_B=5127 |
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| 146 | mem_stacks_B=0 |
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| 147 | heap_tree=empty |
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| 148 | #----------- |
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| 149 | snapshot=10 |
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| 150 | #----------- |
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| 151 | time=12346601 |
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| 152 | mem_heap_B=55651 |
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| 153 | mem_heap_extra_B=5645 |
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| 154 | mem_stacks_B=0 |
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| 155 | heap_tree=empty |
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| 156 | #----------- |
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| 157 | snapshot=11 |
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| 158 | #----------- |
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| 159 | time=13737728 |
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| 160 | mem_heap_B=62752 |
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| 161 | mem_heap_extra_B=6520 |
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| 162 | mem_stacks_B=0 |
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| 163 | heap_tree=empty |
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| 164 | #----------- |
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| 165 | snapshot=12 |
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| 166 | #----------- |
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| 167 | time=14918262 |
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| 168 | mem_heap_B=72381 |
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| 169 | mem_heap_extra_B=7883 |
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| 170 | mem_stacks_B=0 |
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| 171 | heap_tree=empty |
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| 172 | #----------- |
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| 173 | snapshot=13 |
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| 174 | #----------- |
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| 175 | time=16778194 |
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| 176 | mem_heap_B=78701 |
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| 177 | mem_heap_extra_B=9891 |
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| 178 | mem_stacks_B=0 |
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| 179 | heap_tree=empty |
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| 180 | #----------- |
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| 181 | snapshot=14 |
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| 182 | #----------- |
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| 183 | time=18107144 |
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| 184 | mem_heap_B=83491 |
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| 185 | mem_heap_extra_B=10845 |
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| 186 | mem_stacks_B=0 |
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| 187 | heap_tree=detailed |
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| 188 | n4: 83491 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. |
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| 189 | n5: 39388 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 190 | n1: 16718 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 191 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 192 | n1: 16718 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 193 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 194 | n1: 2380 0x8051997: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 195 | n0: 2380 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 196 | n1: 2380 0x80519BF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 197 | n0: 2380 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 198 | n1: 1192 0x8050AEB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 199 | n0: 1192 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 200 | n2: 30408 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 201 | n1: 28364 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 202 | n0: 28364 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 203 | n1: 2044 0x804AC5F: allocateArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 204 | n1: 2044 0x804D3B3: createArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 205 | n1: 2044 0x80515AD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 206 | n0: 2044 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 207 | n2: 13066 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 208 | n1: 12300 0x80518BD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 209 | n0: 12300 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 210 | n0: 766 in 9 places, all below massif's threshold (01.00%) |
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| 211 | n0: 629 in 4 places, all below massif's threshold (01.00%) |
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| 212 | #----------- |
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| 213 | snapshot=15 |
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| 214 | #----------- |
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| 215 | time=18941183 |
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| 216 | mem_heap_B=86361 |
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| 217 | mem_heap_extra_B=11679 |
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| 218 | mem_stacks_B=0 |
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| 219 | heap_tree=empty |
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| 220 | #----------- |
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| 221 | snapshot=16 |
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| 222 | #----------- |
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| 223 | time=20229339 |
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| 224 | mem_heap_B=90501 |
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| 225 | mem_heap_extra_B=13403 |
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| 226 | mem_stacks_B=0 |
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| 227 | heap_tree=detailed |
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| 228 | n4: 90501 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. |
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| 229 | n5: 39388 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 230 | n1: 16718 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 231 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 232 | n1: 16718 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 233 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 234 | n1: 2380 0x8051997: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 235 | n0: 2380 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 236 | n1: 2380 0x80519BF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 237 | n0: 2380 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 238 | n1: 1192 0x8050AEB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 239 | n0: 1192 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 240 | n2: 30408 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 241 | n1: 28364 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 242 | n0: 28364 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 243 | n1: 2044 0x804AC5F: allocateArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 244 | n1: 2044 0x804D3B3: createArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 245 | n1: 2044 0x80515AD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 246 | n0: 2044 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 247 | n2: 20076 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 248 | n1: 19310 0x80518BD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 249 | n0: 19310 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
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| 250 | n0: 766 in 9 places, all below massif's threshold (01.00%) |
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| 251 | n0: 629 in 4 places, all below massif's threshold (01.00%) |
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| 252 | #----------- |
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| 253 | snapshot=17 |
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| 254 | #----------- |
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| 255 | time=22425236 |
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| 256 | mem_heap_B=90189 |
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| 257 | mem_heap_extra_B=13403 |
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| 258 | mem_stacks_B=0 |
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| 259 | heap_tree=empty |
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| 260 | #----------- |
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| 261 | snapshot=18 |
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| 262 | #----------- |
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| 263 | time=23728723 |
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| 264 | mem_heap_B=151544 |
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| 265 | mem_heap_extra_B=18648 |
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| 266 | mem_stacks_B=0 |
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| 267 | heap_tree=empty |
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| 268 | #----------- |
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| 269 | snapshot=19 |
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| 270 | #----------- |
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| 271 | time=25512801 |
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| 272 | mem_heap_B=221629 |
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| 273 | mem_heap_extra_B=25603 |
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| 274 | mem_stacks_B=0 |
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| 275 | heap_tree=empty |
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| 276 | #----------- |
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| 277 | snapshot=20 |
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| 278 | #----------- |
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| 279 | time=26701745 |
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| 280 | mem_heap_B=268431 |
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| 281 | mem_heap_extra_B=29633 |
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| 282 | mem_stacks_B=0 |
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| 283 | heap_tree=empty |
|---|
| 284 | #----------- |
|---|
| 285 | snapshot=21 |
|---|
| 286 | #----------- |
|---|
| 287 | time=27890905 |
|---|
| 288 | mem_heap_B=315247 |
|---|
| 289 | mem_heap_extra_B=33505 |
|---|
| 290 | mem_stacks_B=0 |
|---|
| 291 | heap_tree=empty |
|---|
| 292 | #----------- |
|---|
| 293 | snapshot=22 |
|---|
| 294 | #----------- |
|---|
| 295 | time=29135696 |
|---|
| 296 | mem_heap_B=364324 |
|---|
| 297 | mem_heap_extra_B=37564 |
|---|
| 298 | mem_stacks_B=0 |
|---|
| 299 | heap_tree=detailed |
|---|
| 300 | n4: 364324 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. |
|---|
| 301 | n3: 283859 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 302 | n1: 263650 0x8066429: importReadSet (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 303 | n0: 263650 0x80553C1: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 304 | n1: 19310 0x80518BD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 305 | n0: 19310 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 306 | n0: 899 in 10 places, all below massif's threshold (01.00%) |
|---|
| 307 | n4: 49428 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 308 | n1: 16718 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 309 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 310 | n1: 16718 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 311 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 312 | n1: 8000 0x80662CE: importReadSet (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 313 | n0: 8000 0x80553C1: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 314 | n0: 7992 in 5 places, all below massif's threshold (01.00%) |
|---|
| 315 | n2: 30408 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 316 | n1: 28364 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 317 | n0: 28364 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 318 | n0: 2044 in 1 place, below massif's threshold (01.00%) |
|---|
| 319 | n0: 629 in 4 places, all below massif's threshold (01.00%) |
|---|
| 320 | #----------- |
|---|
| 321 | snapshot=23 |
|---|
| 322 | #----------- |
|---|
| 323 | time=33307931 |
|---|
| 324 | mem_heap_B=363972 |
|---|
| 325 | mem_heap_extra_B=37556 |
|---|
| 326 | mem_stacks_B=0 |
|---|
| 327 | heap_tree=empty |
|---|
| 328 | #----------- |
|---|
| 329 | snapshot=24 |
|---|
| 330 | #----------- |
|---|
| 331 | time=34366455 |
|---|
| 332 | mem_heap_B=396511 |
|---|
| 333 | mem_heap_extra_B=34081 |
|---|
| 334 | mem_stacks_B=0 |
|---|
| 335 | heap_tree=empty |
|---|
| 336 | #----------- |
|---|
| 337 | snapshot=25 |
|---|
| 338 | #----------- |
|---|
| 339 | time=35558415 |
|---|
| 340 | mem_heap_B=351447 |
|---|
| 341 | mem_heap_extra_B=29609 |
|---|
| 342 | mem_stacks_B=0 |
|---|
| 343 | heap_tree=empty |
|---|
| 344 | #----------- |
|---|
| 345 | snapshot=26 |
|---|
| 346 | #----------- |
|---|
| 347 | time=36750375 |
|---|
| 348 | mem_heap_B=306383 |
|---|
| 349 | mem_heap_extra_B=25137 |
|---|
| 350 | mem_stacks_B=0 |
|---|
| 351 | heap_tree=empty |
|---|
| 352 | #----------- |
|---|
| 353 | snapshot=27 |
|---|
| 354 | #----------- |
|---|
| 355 | time=37942335 |
|---|
| 356 | mem_heap_B=260736 |
|---|
| 357 | mem_heap_extra_B=21248 |
|---|
| 358 | mem_stacks_B=0 |
|---|
| 359 | heap_tree=empty |
|---|
| 360 | #----------- |
|---|
| 361 | snapshot=28 |
|---|
| 362 | #----------- |
|---|
| 363 | time=39134295 |
|---|
| 364 | mem_heap_B=214984 |
|---|
| 365 | mem_heap_extra_B=17464 |
|---|
| 366 | mem_stacks_B=0 |
|---|
| 367 | heap_tree=empty |
|---|
| 368 | #----------- |
|---|
| 369 | snapshot=29 |
|---|
| 370 | #----------- |
|---|
| 371 | time=40661243 |
|---|
| 372 | mem_heap_B=160439 |
|---|
| 373 | mem_heap_extra_B=13449 |
|---|
| 374 | mem_stacks_B=0 |
|---|
| 375 | heap_tree=empty |
|---|
| 376 | #----------- |
|---|
| 377 | snapshot=30 |
|---|
| 378 | #----------- |
|---|
| 379 | time=42149046 |
|---|
| 380 | mem_heap_B=2372741 |
|---|
| 381 | mem_heap_extra_B=14443 |
|---|
| 382 | mem_stacks_B=0 |
|---|
| 383 | heap_tree=peak |
|---|
| 384 | n4: 2372741 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. |
|---|
| 385 | n3: 2127556 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 386 | n1: 2097148 0x806E23B: expandLongNode (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 387 | n1: 2097148 0x806E94F: exploitShortReadPairs (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 388 | n0: 2097148 0x80543B6: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 389 | n1: 28364 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 390 | n0: 28364 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 391 | n0: 2044 in 1 place, below massif's threshold (01.00%) |
|---|
| 392 | n3: 185260 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 393 | n1: 81608 0x80733FF: prepareGraphForLocalCorrections (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 394 | n1: 81608 0x806E8C8: exploitShortReadPairs (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 395 | n0: 81608 0x80543B6: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 396 | n0: 53652 in 26 places, all below massif's threshold (01.00%) |
|---|
| 397 | n1: 50000 0x8049A05: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 398 | n1: 50000 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 399 | n0: 50000 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 400 | n1: 53672 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 401 | n0: 53672 in 18 places, all below massif's threshold (01.00%) |
|---|
| 402 | n0: 6253 in 6 places, all below massif's threshold (01.00%) |
|---|
| 403 | #----------- |
|---|
| 404 | snapshot=31 |
|---|
| 405 | #----------- |
|---|
| 406 | time=43169494 |
|---|
| 407 | mem_heap_B=168011 |
|---|
| 408 | mem_heap_extra_B=13485 |
|---|
| 409 | mem_stacks_B=0 |
|---|
| 410 | heap_tree=empty |
|---|
| 411 | #----------- |
|---|
| 412 | snapshot=32 |
|---|
| 413 | #----------- |
|---|
| 414 | time=44859167 |
|---|
| 415 | mem_heap_B=168011 |
|---|
| 416 | mem_heap_extra_B=13485 |
|---|
| 417 | mem_stacks_B=0 |
|---|
| 418 | heap_tree=empty |
|---|
| 419 | #----------- |
|---|
| 420 | snapshot=33 |
|---|
| 421 | #----------- |
|---|
| 422 | time=45917389 |
|---|
| 423 | mem_heap_B=168011 |
|---|
| 424 | mem_heap_extra_B=13485 |
|---|
| 425 | mem_stacks_B=0 |
|---|
| 426 | heap_tree=empty |
|---|
| 427 | #----------- |
|---|
| 428 | snapshot=34 |
|---|
| 429 | #----------- |
|---|
| 430 | time=46999637 |
|---|
| 431 | mem_heap_B=168011 |
|---|
| 432 | mem_heap_extra_B=13485 |
|---|
| 433 | mem_stacks_B=0 |
|---|
| 434 | heap_tree=empty |
|---|
| 435 | #----------- |
|---|
| 436 | snapshot=35 |
|---|
| 437 | #----------- |
|---|
| 438 | time=48799821 |
|---|
| 439 | mem_heap_B=168011 |
|---|
| 440 | mem_heap_extra_B=13485 |
|---|
| 441 | mem_stacks_B=0 |
|---|
| 442 | heap_tree=empty |
|---|
| 443 | #----------- |
|---|
| 444 | snapshot=36 |
|---|
| 445 | #----------- |
|---|
| 446 | time=50410765 |
|---|
| 447 | mem_heap_B=168011 |
|---|
| 448 | mem_heap_extra_B=13485 |
|---|
| 449 | mem_stacks_B=0 |
|---|
| 450 | heap_tree=empty |
|---|
| 451 | #----------- |
|---|
| 452 | snapshot=37 |
|---|
| 453 | #----------- |
|---|
| 454 | time=51544977 |
|---|
| 455 | mem_heap_B=168011 |
|---|
| 456 | mem_heap_extra_B=13485 |
|---|
| 457 | mem_stacks_B=0 |
|---|
| 458 | heap_tree=empty |
|---|
| 459 | #----------- |
|---|
| 460 | snapshot=38 |
|---|
| 461 | #----------- |
|---|
| 462 | time=52624316 |
|---|
| 463 | mem_heap_B=168011 |
|---|
| 464 | mem_heap_extra_B=13485 |
|---|
| 465 | mem_stacks_B=0 |
|---|
| 466 | heap_tree=empty |
|---|
| 467 | #----------- |
|---|
| 468 | snapshot=39 |
|---|
| 469 | #----------- |
|---|
| 470 | time=53432410 |
|---|
| 471 | mem_heap_B=168011 |
|---|
| 472 | mem_heap_extra_B=13485 |
|---|
| 473 | mem_stacks_B=0 |
|---|
| 474 | heap_tree=empty |
|---|
| 475 | #----------- |
|---|
| 476 | snapshot=40 |
|---|
| 477 | #----------- |
|---|
| 478 | time=54949668 |
|---|
| 479 | mem_heap_B=168011 |
|---|
| 480 | mem_heap_extra_B=13485 |
|---|
| 481 | mem_stacks_B=0 |
|---|
| 482 | heap_tree=empty |
|---|
| 483 | #----------- |
|---|
| 484 | snapshot=41 |
|---|
| 485 | #----------- |
|---|
| 486 | time=56339363 |
|---|
| 487 | mem_heap_B=168011 |
|---|
| 488 | mem_heap_extra_B=13485 |
|---|
| 489 | mem_stacks_B=0 |
|---|
| 490 | heap_tree=empty |
|---|
| 491 | #----------- |
|---|
| 492 | snapshot=42 |
|---|
| 493 | #----------- |
|---|
| 494 | time=57550113 |
|---|
| 495 | mem_heap_B=168011 |
|---|
| 496 | mem_heap_extra_B=13485 |
|---|
| 497 | mem_stacks_B=0 |
|---|
| 498 | heap_tree=detailed |
|---|
| 499 | n5: 168011 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. |
|---|
| 500 | n5: 85726 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 501 | n1: 50000 0x8049A05: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 502 | n1: 50000 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 503 | n0: 50000 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 504 | n1: 16718 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 505 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 506 | n1: 16718 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 507 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 508 | n1: 2000 0x80662E8: importReadSet (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 509 | n0: 2000 0x80553C1: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 510 | n0: 290 in 24 places, all below massif's threshold (01.00%) |
|---|
| 511 | n4: 44104 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 512 | n1: 19310 0x80518BD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 513 | n0: 19310 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 514 | n1: 16000 0x80499A2: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 515 | n1: 16000 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 516 | n0: 16000 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 517 | n1: 8000 0x8065E35: createReadPairingArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 518 | n0: 8000 0x8054341: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 519 | n0: 794 in 15 places, all below massif's threshold (01.00%) |
|---|
| 520 | n3: 30408 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 521 | n1: 28364 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 522 | n0: 28364 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 523 | n1: 2044 0x804AC5F: allocateArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 524 | n1: 2044 0x804D3B3: createArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 525 | n1: 2044 0x80515AD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 526 | n0: 2044 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 527 | n0: 0 in 1 place, below massif's threshold (01.00%) |
|---|
| 528 | n3: 7144 0x807D20A: reallocOrExit4 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 529 | n0: 2384 in 2 places, all below massif's threshold (01.00%) |
|---|
| 530 | n2: 2380 0x804C7D7: renumberNodes (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 531 | n2: 2380 0x80570DB: concatenateGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 532 | n0: 2380 0x80543FE: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 533 | n0: 0 in 4 places, all below massif's threshold (01.00%) |
|---|
| 534 | n0: 0 in 1 place, below massif's threshold (01.00%) |
|---|
| 535 | n2: 2380 0x804C800: renumberNodes (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 536 | n2: 2380 0x80570DB: concatenateGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 537 | n0: 2380 0x80543FE: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 538 | n0: 0 in 4 places, all below massif's threshold (01.00%) |
|---|
| 539 | n0: 0 in 1 place, below massif's threshold (01.00%) |
|---|
| 540 | n0: 629 in 5 places, all below massif's threshold (01.00%) |
|---|
| 541 | #----------- |
|---|
| 542 | snapshot=43 |
|---|
| 543 | #----------- |
|---|
| 544 | time=58521602 |
|---|
| 545 | mem_heap_B=168011 |
|---|
| 546 | mem_heap_extra_B=13485 |
|---|
| 547 | mem_stacks_B=0 |
|---|
| 548 | heap_tree=empty |
|---|
| 549 | #----------- |
|---|
| 550 | snapshot=44 |
|---|
| 551 | #----------- |
|---|
| 552 | time=60387230 |
|---|
| 553 | mem_heap_B=168011 |
|---|
| 554 | mem_heap_extra_B=13485 |
|---|
| 555 | mem_stacks_B=0 |
|---|
| 556 | heap_tree=empty |
|---|
| 557 | #----------- |
|---|
| 558 | snapshot=45 |
|---|
| 559 | #----------- |
|---|
| 560 | time=61774807 |
|---|
| 561 | mem_heap_B=168011 |
|---|
| 562 | mem_heap_extra_B=13485 |
|---|
| 563 | mem_stacks_B=0 |
|---|
| 564 | heap_tree=empty |
|---|
| 565 | #----------- |
|---|
| 566 | snapshot=46 |
|---|
| 567 | #----------- |
|---|
| 568 | time=62663796 |
|---|
| 569 | mem_heap_B=168011 |
|---|
| 570 | mem_heap_extra_B=13485 |
|---|
| 571 | mem_stacks_B=0 |
|---|
| 572 | heap_tree=empty |
|---|
| 573 | #----------- |
|---|
| 574 | snapshot=47 |
|---|
| 575 | #----------- |
|---|
| 576 | time=63734787 |
|---|
| 577 | mem_heap_B=168011 |
|---|
| 578 | mem_heap_extra_B=13485 |
|---|
| 579 | mem_stacks_B=0 |
|---|
| 580 | heap_tree=empty |
|---|
| 581 | #----------- |
|---|
| 582 | snapshot=48 |
|---|
| 583 | #----------- |
|---|
| 584 | time=65581286 |
|---|
| 585 | mem_heap_B=168011 |
|---|
| 586 | mem_heap_extra_B=13485 |
|---|
| 587 | mem_stacks_B=0 |
|---|
| 588 | heap_tree=empty |
|---|
| 589 | #----------- |
|---|
| 590 | snapshot=49 |
|---|
| 591 | #----------- |
|---|
| 592 | time=67173391 |
|---|
| 593 | mem_heap_B=168011 |
|---|
| 594 | mem_heap_extra_B=13485 |
|---|
| 595 | mem_stacks_B=0 |
|---|
| 596 | heap_tree=empty |
|---|
| 597 | #----------- |
|---|
| 598 | snapshot=50 |
|---|
| 599 | #----------- |
|---|
| 600 | time=67996600 |
|---|
| 601 | mem_heap_B=168011 |
|---|
| 602 | mem_heap_extra_B=13485 |
|---|
| 603 | mem_stacks_B=0 |
|---|
| 604 | heap_tree=empty |
|---|
| 605 | #----------- |
|---|
| 606 | snapshot=51 |
|---|
| 607 | #----------- |
|---|
| 608 | time=68861240 |
|---|
| 609 | mem_heap_B=168011 |
|---|
| 610 | mem_heap_extra_B=13485 |
|---|
| 611 | mem_stacks_B=0 |
|---|
| 612 | heap_tree=empty |
|---|
| 613 | #----------- |
|---|
| 614 | snapshot=52 |
|---|
| 615 | #----------- |
|---|
| 616 | time=69870635 |
|---|
| 617 | mem_heap_B=168011 |
|---|
| 618 | mem_heap_extra_B=13485 |
|---|
| 619 | mem_stacks_B=0 |
|---|
| 620 | heap_tree=empty |
|---|
| 621 | #----------- |
|---|
| 622 | snapshot=53 |
|---|
| 623 | #----------- |
|---|
| 624 | time=70745259 |
|---|
| 625 | mem_heap_B=168011 |
|---|
| 626 | mem_heap_extra_B=13485 |
|---|
| 627 | mem_stacks_B=0 |
|---|
| 628 | heap_tree=empty |
|---|
| 629 | #----------- |
|---|
| 630 | snapshot=54 |
|---|
| 631 | #----------- |
|---|
| 632 | time=71733159 |
|---|
| 633 | mem_heap_B=168011 |
|---|
| 634 | mem_heap_extra_B=13485 |
|---|
| 635 | mem_stacks_B=0 |
|---|
| 636 | heap_tree=empty |
|---|
| 637 | #----------- |
|---|
| 638 | snapshot=55 |
|---|
| 639 | #----------- |
|---|
| 640 | time=72563529 |
|---|
| 641 | mem_heap_B=168011 |
|---|
| 642 | mem_heap_extra_B=13485 |
|---|
| 643 | mem_stacks_B=0 |
|---|
| 644 | heap_tree=empty |
|---|
| 645 | #----------- |
|---|
| 646 | snapshot=56 |
|---|
| 647 | #----------- |
|---|
| 648 | time=73462422 |
|---|
| 649 | mem_heap_B=168011 |
|---|
| 650 | mem_heap_extra_B=13485 |
|---|
| 651 | mem_stacks_B=0 |
|---|
| 652 | heap_tree=empty |
|---|
| 653 | #----------- |
|---|
| 654 | snapshot=57 |
|---|
| 655 | #----------- |
|---|
| 656 | time=74361033 |
|---|
| 657 | mem_heap_B=168011 |
|---|
| 658 | mem_heap_extra_B=13485 |
|---|
| 659 | mem_stacks_B=0 |
|---|
| 660 | heap_tree=empty |
|---|
| 661 | #----------- |
|---|
| 662 | snapshot=58 |
|---|
| 663 | #----------- |
|---|
| 664 | time=75174852 |
|---|
| 665 | mem_heap_B=168011 |
|---|
| 666 | mem_heap_extra_B=13485 |
|---|
| 667 | mem_stacks_B=0 |
|---|
| 668 | heap_tree=detailed |
|---|
| 669 | n5: 168011 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. |
|---|
| 670 | n5: 85726 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 671 | n1: 50000 0x8049A05: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 672 | n1: 50000 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 673 | n0: 50000 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 674 | n1: 16718 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 675 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 676 | n1: 16718 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 677 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 678 | n1: 2000 0x80662E8: importReadSet (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 679 | n0: 2000 0x80553C1: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 680 | n0: 290 in 24 places, all below massif's threshold (01.00%) |
|---|
| 681 | n4: 44104 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 682 | n1: 19310 0x80518BD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 683 | n0: 19310 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 684 | n1: 16000 0x80499A2: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 685 | n1: 16000 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 686 | n0: 16000 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 687 | n1: 8000 0x8065E35: createReadPairingArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 688 | n0: 8000 0x8054341: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 689 | n0: 794 in 15 places, all below massif's threshold (01.00%) |
|---|
| 690 | n3: 30408 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 691 | n1: 28364 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 692 | n0: 28364 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 693 | n1: 2044 0x804AC5F: allocateArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 694 | n1: 2044 0x804D3B3: createArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 695 | n1: 2044 0x80515AD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 696 | n0: 2044 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 697 | n0: 0 in 1 place, below massif's threshold (01.00%) |
|---|
| 698 | n3: 7144 0x807D20A: reallocOrExit4 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 699 | n0: 2384 in 2 places, all below massif's threshold (01.00%) |
|---|
| 700 | n2: 2380 0x804C7D7: renumberNodes (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 701 | n2: 2380 0x80570DB: concatenateGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 702 | n0: 2380 0x80543FE: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 703 | n0: 0 in 4 places, all below massif's threshold (01.00%) |
|---|
| 704 | n0: 0 in 1 place, below massif's threshold (01.00%) |
|---|
| 705 | n2: 2380 0x804C800: renumberNodes (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 706 | n2: 2380 0x80570DB: concatenateGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 707 | n0: 2380 0x80543FE: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 708 | n0: 0 in 4 places, all below massif's threshold (01.00%) |
|---|
| 709 | n0: 0 in 1 place, below massif's threshold (01.00%) |
|---|
| 710 | n0: 629 in 5 places, all below massif's threshold (01.00%) |
|---|
| 711 | #----------- |
|---|
| 712 | snapshot=59 |
|---|
| 713 | #----------- |
|---|
| 714 | time=75990778 |
|---|
| 715 | mem_heap_B=168011 |
|---|
| 716 | mem_heap_extra_B=13485 |
|---|
| 717 | mem_stacks_B=0 |
|---|
| 718 | heap_tree=empty |
|---|
| 719 | #----------- |
|---|
| 720 | snapshot=60 |
|---|
| 721 | #----------- |
|---|
| 722 | time=76839553 |
|---|
| 723 | mem_heap_B=168011 |
|---|
| 724 | mem_heap_extra_B=13485 |
|---|
| 725 | mem_stacks_B=0 |
|---|
| 726 | heap_tree=empty |
|---|
| 727 | #----------- |
|---|
| 728 | snapshot=61 |
|---|
| 729 | #----------- |
|---|
| 730 | time=77732760 |
|---|
| 731 | mem_heap_B=168011 |
|---|
| 732 | mem_heap_extra_B=13485 |
|---|
| 733 | mem_stacks_B=0 |
|---|
| 734 | heap_tree=empty |
|---|
| 735 | #----------- |
|---|
| 736 | snapshot=62 |
|---|
| 737 | #----------- |
|---|
| 738 | time=78569147 |
|---|
| 739 | mem_heap_B=168011 |
|---|
| 740 | mem_heap_extra_B=13485 |
|---|
| 741 | mem_stacks_B=0 |
|---|
| 742 | heap_tree=empty |
|---|
| 743 | #----------- |
|---|
| 744 | snapshot=63 |
|---|
| 745 | #----------- |
|---|
| 746 | time=79491072 |
|---|
| 747 | mem_heap_B=168011 |
|---|
| 748 | mem_heap_extra_B=13485 |
|---|
| 749 | mem_stacks_B=0 |
|---|
| 750 | heap_tree=empty |
|---|
| 751 | #----------- |
|---|
| 752 | snapshot=64 |
|---|
| 753 | #----------- |
|---|
| 754 | time=80275205 |
|---|
| 755 | mem_heap_B=168011 |
|---|
| 756 | mem_heap_extra_B=13485 |
|---|
| 757 | mem_stacks_B=0 |
|---|
| 758 | heap_tree=empty |
|---|
| 759 | #----------- |
|---|
| 760 | snapshot=65 |
|---|
| 761 | #----------- |
|---|
| 762 | time=81085261 |
|---|
| 763 | mem_heap_B=168011 |
|---|
| 764 | mem_heap_extra_B=13485 |
|---|
| 765 | mem_stacks_B=0 |
|---|
| 766 | heap_tree=empty |
|---|
| 767 | #----------- |
|---|
| 768 | snapshot=66 |
|---|
| 769 | #----------- |
|---|
| 770 | time=81905767 |
|---|
| 771 | mem_heap_B=168011 |
|---|
| 772 | mem_heap_extra_B=13485 |
|---|
| 773 | mem_stacks_B=0 |
|---|
| 774 | heap_tree=empty |
|---|
| 775 | #----------- |
|---|
| 776 | snapshot=67 |
|---|
| 777 | #----------- |
|---|
| 778 | time=82701841 |
|---|
| 779 | mem_heap_B=168011 |
|---|
| 780 | mem_heap_extra_B=13485 |
|---|
| 781 | mem_stacks_B=0 |
|---|
| 782 | heap_tree=empty |
|---|
| 783 | #----------- |
|---|
| 784 | snapshot=68 |
|---|
| 785 | #----------- |
|---|
| 786 | time=83704805 |
|---|
| 787 | mem_heap_B=168011 |
|---|
| 788 | mem_heap_extra_B=13485 |
|---|
| 789 | mem_stacks_B=0 |
|---|
| 790 | heap_tree=detailed |
|---|
| 791 | n5: 168011 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. |
|---|
| 792 | n5: 85726 0x807D2D2: callocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 793 | n1: 50000 0x8049A05: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 794 | n1: 50000 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 795 | n0: 50000 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 796 | n1: 16718 0x8050DCB: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 797 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 798 | n1: 16718 0x8050FB8: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 799 | n0: 16718 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 800 | n1: 2000 0x80662E8: importReadSet (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 801 | n0: 2000 0x80553C1: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 802 | n0: 290 in 24 places, all below massif's threshold (01.00%) |
|---|
| 803 | n4: 44104 0x807D393: mallocOrExit3 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 804 | n1: 19310 0x80518BD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 805 | n0: 19310 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 806 | n1: 16000 0x80499A2: newTightStringArrayFromStringArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 807 | n1: 16000 0x80661B0: convertSequences (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 808 | n0: 16000 0x80553CB: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 809 | n1: 8000 0x8065E35: createReadPairingArray (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 810 | n0: 8000 0x8054341: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 811 | n0: 794 in 15 places, all below massif's threshold (01.00%) |
|---|
| 812 | n3: 30408 0x806595D: allocatePointer (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 813 | n1: 28364 0x8050BBF: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 814 | n0: 28364 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 815 | n1: 2044 0x804AC5F: allocateArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 816 | n1: 2044 0x804D3B3: createArc (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 817 | n1: 2044 0x80515AD: importGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 818 | n0: 2044 0x8054096: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 819 | n0: 0 in 1 place, below massif's threshold (01.00%) |
|---|
| 820 | n3: 7144 0x807D20A: reallocOrExit4 (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 821 | n0: 2384 in 2 places, all below massif's threshold (01.00%) |
|---|
| 822 | n2: 2380 0x804C7D7: renumberNodes (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 823 | n2: 2380 0x80570DB: concatenateGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 824 | n0: 2380 0x80543FE: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 825 | n0: 0 in 4 places, all below massif's threshold (01.00%) |
|---|
| 826 | n0: 0 in 1 place, below massif's threshold (01.00%) |
|---|
| 827 | n2: 2380 0x804C800: renumberNodes (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 828 | n2: 2380 0x80570DB: concatenateGraph (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 829 | n0: 2380 0x80543FE: main (in /home/jazz/11-05-04_velvet_test/velvet_1.1.03/velvetg) |
|---|
| 830 | n0: 0 in 4 places, all below massif's threshold (01.00%) |
|---|
| 831 | n0: 0 in 1 place, below massif's threshold (01.00%) |
|---|
| 832 | n0: 629 in 5 places, all below massif's threshold (01.00%) |
|---|
| 833 | #----------- |
|---|
| 834 | snapshot=69 |
|---|
| 835 | #----------- |
|---|
| 836 | time=84516428 |
|---|
| 837 | mem_heap_B=168011 |
|---|
| 838 | mem_heap_extra_B=13485 |
|---|
| 839 | mem_stacks_B=0 |
|---|
| 840 | heap_tree=empty |
|---|
| 841 | #----------- |
|---|
| 842 | snapshot=70 |
|---|
| 843 | #----------- |
|---|
| 844 | time=85307941 |
|---|
| 845 | mem_heap_B=168011 |
|---|
| 846 | mem_heap_extra_B=13485 |
|---|
| 847 | mem_stacks_B=0 |
|---|
| 848 | heap_tree=empty |
|---|
| 849 | #----------- |
|---|
| 850 | snapshot=71 |
|---|
| 851 | #----------- |
|---|
| 852 | time=89232699 |
|---|
| 853 | mem_heap_B=167651 |
|---|
| 854 | mem_heap_extra_B=13469 |
|---|
| 855 | mem_stacks_B=0 |
|---|
| 856 | heap_tree=empty |
|---|
| 857 | #----------- |
|---|
| 858 | snapshot=72 |
|---|
| 859 | #----------- |
|---|
| 860 | time=131622888 |
|---|
| 861 | mem_heap_B=167651 |
|---|
| 862 | mem_heap_extra_B=13469 |
|---|
| 863 | mem_stacks_B=0 |
|---|
| 864 | heap_tree=empty |
|---|
