jazz/10-01-18: Parallel-MPI-Simple.error

Script started on 2010年01月18日 (週一) 09時49分49秒
jazz@bio001:~$ sudo cpan
Terminal does not support AddHistory.

cpan shell -- CPAN exploration and modules installation (v1.9205)
ReadLine support available (maybe install Bundle::CPAN or Bundle::CPANxxl?)

cpan[1]> install Parallel::MPI::Simple
CPAN: Storable loaded ok (v2.18)
Going to read /home/jazz/.cpan/Metadata
  Database was generated on Mon, 18 Jan 2010 00:33:44 GMT
CPAN: YAML loaded ok (v0.66)
Running install for module 'Parallel::MPI::Simple'
Running make for A/AJ/AJGOUGH/Parallel-MPI-Simple-0.03.tar.gz
CPAN: Digest::SHA loaded ok (v5.45)
CPAN: Compress::Zlib loaded ok (v2.012)
Checksum for /home/jazz/.cpan/sources/authors/id/A/AJ/AJGOUGH/Parallel-MPI-Simple-0.03.tar.gz ok
Scanning cache /home/jazz/.cpan/build for sizes
DONE
Parallel-MPI-Simple-0.03/
Parallel-MPI-Simple-0.03/Simple.pm
Parallel-MPI-Simple-0.03/Makefile.PL
Parallel-MPI-Simple-0.03/Changes
Parallel-MPI-Simple-0.03/INSTALL
Parallel-MPI-Simple-0.03/MANIFEST
Parallel-MPI-Simple-0.03/test.pl
Parallel-MPI-Simple-0.03/ic.pl
Parallel-MPI-Simple-0.03/Simple.xs
CPAN: File::Temp loaded ok (v0.18)

  CPAN.pm: Going to build A/AJ/AJGOUGH/Parallel-MPI-Simple-0.03.tar.gz

I'm about to build the Makefile for Parallel::MPI::Simple.

If you find you cannot build this module, or that the tests fail, you
may be on an odd system where you need to do more than pass -lmpi to
your C compiler to build MPI applications.  If this is the case, rerun
perl Makefile.PL with appropriate LDFLAGS= and CCFLAGS= arguments.

Also, this module is very new so if you manage to get it working on one
of the systems not listed in INSTALL I'd love to hear about it.
Checking if your kit is complete...
Looks good
Note (probably harmless): No library found for -lmpi
Writing Makefile for Parallel::MPI::Simple
cp ic.pl blib/lib/Parallel/MPI/ic.pl
cp Simple.pm blib/lib/Parallel/MPI/Simple.pm
/usr/bin/perl /usr/share/perl/5.10/ExtUtils/xsubpp  -typemap /usr/share/perl/5.10/ExtUtils/typemap  Simple.xs > Simple.xsc && mv Simple.xsc Simple.c
cc -c   -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -g   -DVERSION=\"0.03\" -DXS_VERSION=\"0.03\" -fPIC "-I/usr/lib/perl/5.10/CORE"   Simple.c
Simple.xs:8:18: error: mpi.h: No such file or directory
Simple.xs: In function ‘_Bcast’:
Simple.xs:24: error: ‘MPI_Comm’ undeclared (first use in this function)
Simple.xs:24: error: (Each undeclared identifier is reported only once
Simple.xs:24: error: for each function it appears in.)
Simple.xs:27: error: ‘MPI_INT’ undeclared (first use in this function)
Simple.xs:28: error: ‘MPI_CHAR’ undeclared (first use in this function)
Simple.xs: In function ‘_Send’:
Simple.xs:51: error: ‘MPI_INT’ undeclared (first use in this function)
Simple.xs:51: error: ‘MPI_Comm’ undeclared (first use in this function)
Simple.xs:52: error: ‘MPI_CHAR’ undeclared (first use in this function)
Simple.xs: In function ‘_Recv’:
Simple.xs:63: error: ‘MPI_Status’ undeclared (first use in this function)
Simple.xs:63: error: expected ‘;’ before ‘tstatus’
Simple.xs:68: error: ‘MPI_INT’ undeclared (first use in this function)
Simple.xs:68: error: ‘MPI_Comm’ undeclared (first use in this function)
Simple.xs:68: error: ‘tstatus’ undeclared (first use in this function)
Simple.xs:71: error: ‘MPI_CHAR’ undeclared (first use in this function)
Simple.xs: In function ‘_Comm_rank’:
Simple.xs:87: error: ‘MPI_Comm’ undeclared (first use in this function)
Simple.xs: In function ‘_Comm_size’:
Simple.xs:94: error: ‘MPI_Comm’ undeclared (first use in this function)
Simple.xs: In function ‘COMM_WORLD’:
Simple.xs:100: error: ‘MPI_COMM_WORLD’ undeclared (first use in this function)
Simple.xs: In function ‘Barrier’:
Simple.xs:105: error: ‘MPI_Comm’ undeclared (first use in this function)
Simple.xs: In function ‘_Gather’:
Simple.xs:128: error: ‘MPI_Status’ undeclared (first use in this function)
Simple.xs:128: error: expected ‘;’ before ‘tstatus’
Simple.xs:134: error: ‘MPI_Comm’ undeclared (first use in this function)
Simple.xs:138: error: ‘MPI_INT’ undeclared (first use in this function)
Simple.xs:151: error: ‘MPI_CHAR’ undeclared (first use in this function)
Simple.xs:152: error: ‘tstatus’ undeclared (first use in this function)
Simple.xs: In function ‘_Comm_compare’:
Simple.xs:174: error: ‘MPI_Comm’ undeclared (first use in this function)
Simple.xs:176: error: ‘MPI_IDENT’ undeclared (first use in this function)
Simple.xs:178: error: ‘MPI_CONGRUENT’ undeclared (first use in this function)
Simple.xs:180: error: ‘MPI_SIMILAR’ undeclared (first use in this function)
Simple.xs:182: error: ‘MPI_UNEQUAL’ undeclared (first use in this function)
Simple.xs: In function ‘_Comm_free’:
Simple.xs:191: error: ‘MPI_Comm’ undeclared (first use in this function)
Simple.xs:191: error: expected expression before ‘)’ token
Simple.xs:192: error: ‘MPI_COMM_NULL’ undeclared (first use in this function)
Simple.xs: In function ‘_Comm_dup’:
Simple.xs:197: error: ‘MPI_Comm’ undeclared (first use in this function)
Simple.xs:197: error: expected ‘;’ before ‘newcomm’
Simple.xs:198: error: ‘newcomm’ undeclared (first use in this function)
Simple.xs: In function ‘_Comm_split’:
Simple.xs:203: error: ‘MPI_Comm’ undeclared (first use in this function)
Simple.xs:203: error: expected ‘;’ before ‘newcomm’
Simple.xs:206: error: ‘MPI_UNDEFINED’ undeclared (first use in this function)
Simple.xs:207: error: ‘newcomm’ undeclared (first use in this function)
make: *** [Simple.o] Error 1
  AJGOUGH/Parallel-MPI-Simple-0.03.tar.gz
  /usr/bin/make -- NOT OK
Running make test
  Can't test without successful make
Running make install
  Make had returned bad status, install seems impossible
Failed during this command:
 AJGOUGH/Parallel-MPI-Simple-0.03.tar.gz      : make NO
Script done on 2010年01月18日 (週一) 09時50分33秒