Changes between Version 2 and Version 3 of III141129/Lab8

Timestamp:

Nov 30, 2014, 3:36:53 PM (11 years ago)

Author:

jazz

Comment:

--

III141129/Lab8

@@ -83 +83 @@
 ~$ chmod a+x testmapper.sh
 ~$ cat split-00.txt | ./testmapper.sh 
-h998@hadoop:/home/h998> hadoop fs -get /user/h998/input-1.fa /tmp/h998/input-1.fa
-h998@hadoop:/home/h998> velveth output-input-1.fa 17 -fasta -short /tmp/h998/input-1.fa
-h998@hadoop:/home/h998> hadoop fs -put output-input-1.fa .
-h998@hadoop:/home/h998> hadoop fs -get /user/h998/input-2.fa /tmp/h998/input-2.fa
+user00@hdp01.3du.me:/home/user00> hadoop fs -get /user/user00/input-1.fa /tmp/user00/input-1.fa
+user00@hdp01.3du.me:/home/user00> velveth output-input-1.fa 17 -fasta -short /tmp/user00/input-1.fa
+user00@hdp01.3du.me:/home/user00> hadoop fs -put output-input-1.fa .
+user00@hdp01.3du.me:/home/user00> hadoop fs -get /user/user00/input-2.fa /tmp/user00/input-2.fa
+user00@hdp01.3du.me:/home/user00> velveth output-input-2.fa 17 -fasta -short /tmp/user00/input-2.fa
+user00@hdp01.3du.me:/home/user00> hadoop fs -put output-input-2.fa .
 }}}
  * 讓我們用 Hadoop Streaming 的方式來執行 testmapper.sh
 {{{
-~$ hadoop jar hadoop-streaming.jar -input lab10_input -output lab10_out1 -mapper testmapper.sh -file testmapper.sh 
+~$ hadoop jar hadoop-streaming.jar -input lab10_input -output lab10_out1 -mapper testmapper.sh -file testmapper.sh -numReduceTasks 0
 }}}
  * 觀察 lab10_out1 的結果，看與本機執行有何不同呢？
 {{{
 ~$ hadoop fs -cat /user/$(whoami)/lab10_out1/part-00000 | head
-hadoop@hadoop104:/var/lib/hadoop/cache/hadoop/mapred/local/taskTracker/jobcache/job_201106041247_1820/attempt_201106041247_1820_m_000002_0/work> hadoop fs -get /user/h998/input-60.fa /tmp/h998/input-60.fa    
-hadoop@hadoop104:/var/lib/hadoop/cache/hadoop/mapred/local/taskTracker/jobcache/job_201106041247_1820/attempt_201106041247_1820_m_000002_0/work> hadoop fs -get /user/h998/input-61.fa /tmp/h998/input-61.fa    
-hadoop@hadoop104:/var/lib/hadoop/cache/hadoop/mapred/local/taskTracker/jobcache/job_201106041247_1820/attempt_201106041247_1820_m_000002_0/work> hadoop fs -get /user/h998/input-62.fa /tmp/h998/input-62.fa    
+root@hdp05.3du.me:/opt/hadoop/var/hadoop-root/mapred/local/taskTracker/user00/jobcache/job_201411281523_0038/attempt_201411281523_0038_m_000000_0/work> hadoop fs -get /user/user00/input-20.fa /tmp/user00/input-20.fa
+root@hdp05.3du.me:/opt/hadoop/var/hadoop-root/mapred/local/taskTracker/user00/jobcache/job_201411281523_0038/attempt_201411281523_0038_m_000000_0/work> velveth output-input-20.fa 17 -fasta -short /tmp/user00/input-20.fa
+root@hdp05.3du.me:/opt/hadoop/var/hadoop-root/mapred/local/taskTracker/user00/jobcache/job_201411281523_0038/attempt_201411281523_0038_m_000000_0/work> hadoop fs -put output-input-20.fa .
+root@hdp05.3du.me:/opt/hadoop/var/hadoop-root/mapred/local/taskTracker/user00/jobcache/job_201411281523_0038/attempt_201411281523_0038_m_000000_0/work> hadoop fs -get /user/user00/input-21.fa /tmp/user00/input-21.fa
+root@hdp05.3du.me:/opt/hadoop/var/hadoop-root/mapred/local/taskTracker/user00/jobcache/job_201411281523_0038/attempt_201411281523_0038_m_000000_0/work> velveth output-input-21.fa 17 -fasta -short /tmp/user00/input-21.fa
+root@hdp05.3du.me:/opt/hadoop/var/hadoop-root/mapred/local/taskTracker/user00/jobcache/job_201411281523_0038/attempt_201411281523_0038_m_000000_0/work> hadoop fs -put output-input-21.fa .
+root@hdp05.3du.me:/opt/hadoop/var/hadoop-root/mapred/local/taskTracker/user00/jobcache/job_201411281523_0038/attempt_201411281523_0038_m_000000_0/work> hadoop fs -get /user/user00/input-22.fa /tmp/user00/input-22.fa
+root@hdp05.3du.me:/opt/hadoop/var/hadoop-root/mapred/local/taskTracker/user00/jobcache/job_201411281523_0038/attempt_201411281523_0038_m_000000_0/work> velveth output-input-22.fa 17 -fasta -short /tmp/user00/input-22.fa
+root@hdp05.3du.me:/opt/hadoop/var/hadoop-root/mapred/local/taskTracker/user00/jobcache/job_201411281523_0038/attempt_201411281523_0038_m_000000_0/work> hadoop fs -put output-input-22.fa .
 }}}